Gene : Cucsa.083780 C. sativus v1.0
Defline:  (1 of 3) PTHR31415:SF2 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  71
Name:  ? Cucsa.083780 Secondary Identifier:  ? PAC:16956472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.083780 0.5kb upstream 0.5kb upstream 1127 true scaffold00858: 490534-491660 Cucumis sativus
Cucsa.083780 0.5kb upstream 0.5kb upstream 500 false scaffold00858: 491161-491660 Cucumis sativus
Cucsa.083780 0.5kb downstream 0.5kb downstream 1127 true scaffold00858: 490034-491160 Cucumis sativus
Cucsa.083780 0.5kb downstream 0.5kb downstream 500 false scaffold00858: 490034-490533 Cucumis sativus
Cucsa.083780 1.0kb upstream 1.0kb upstream 1627 true scaffold00858: 490534-492160 Cucumis sativus
Cucsa.083780 1.0kb upstream 1.0kb upstream 1000 false scaffold00858: 491161-492160 Cucumis sativus
Cucsa.083780 1.0kb downstream 1.0kb downstream 1627 true scaffold00858: 489534-491160 Cucumis sativus
Cucsa.083780 1.0kb downstream 1.0kb downstream 1000 false scaffold00858: 489534-490533 Cucumis sativus
Cucsa.083780 2.0kb upstream 2.0kb upstream 2627 true scaffold00858: 490534-493160 Cucumis sativus
Cucsa.083780 2.0kb upstream 2.0kb upstream 2000 false scaffold00858: 491161-493160 Cucumis sativus
Cucsa.083780 2.0kb downstream 2.0kb downstream 2627 true scaffold00858: 488534-491160 Cucumis sativus
Cucsa.083780 2.0kb downstream 2.0kb downstream 2000 false scaffold00858: 488534-490533 Cucumis sativus
Cucsa.083780 5.0kb upstream 5.0kb upstream 5627 true scaffold00858: 490534-496160 Cucumis sativus
Cucsa.083780 5.0kb upstream 5.0kb upstream 5000 false scaffold00858: 491161-496160 Cucumis sativus
Cucsa.083780 5.0kb downstream 5.0kb downstream 5627 true scaffold00858: 485534-491160 Cucumis sativus
Cucsa.083780 5.0kb downstream 5.0kb downstream 5000 false scaffold00858: 485534-490533 Cucumis sativus
Cucsa.083780 10.0kb upstream 10.0kb upstream 10627 true scaffold00858: 490534-501160 Cucumis sativus
Cucsa.083780 10.0kb upstream 10.0kb upstream 10000 false scaffold00858: 491161-501160 Cucumis sativus
Cucsa.083780 10.0kb downstream 10.0kb downstream 10627 true scaffold00858: 480534-491160 Cucumis sativus
Cucsa.083780 10.0kb downstream 10.0kb downstream 10000 false scaffold00858: 480534-490533 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307613 5265 Fabidae View MSA
124060633 5270 Rosid View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain