Gene : Cucsa.051070 C. sativus v1.0
Defline:  (1 of 1) PTHR11451:SF37 - PROTEIN EARS-1 Genomic Order:  29
Name:  ? Cucsa.051070 Secondary Identifier:  ? PAC:16954173
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5188 Cucumis sativus pathologic  
Csativus PWY-5918 Cucumis sativus pathologic  
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.051070 0.5kb upstream 0.5kb upstream 5535 true scaffold00557: 258294-263828 Cucumis sativus
Cucsa.051070 0.5kb upstream 0.5kb upstream 500 false scaffold00557: 263329-263828 Cucumis sativus
Cucsa.051070 0.5kb downstream 0.5kb downstream 5535 true scaffold00557: 257794-263328 Cucumis sativus
Cucsa.051070 0.5kb downstream 0.5kb downstream 500 false scaffold00557: 257794-258293 Cucumis sativus
Cucsa.051070 1.0kb upstream 1.0kb upstream 6035 true scaffold00557: 258294-264328 Cucumis sativus
Cucsa.051070 1.0kb upstream 1.0kb upstream 1000 false scaffold00557: 263329-264328 Cucumis sativus
Cucsa.051070 1.0kb downstream 1.0kb downstream 6035 true scaffold00557: 257294-263328 Cucumis sativus
Cucsa.051070 1.0kb downstream 1.0kb downstream 1000 false scaffold00557: 257294-258293 Cucumis sativus
Cucsa.051070 2.0kb upstream 2.0kb upstream 7035 true scaffold00557: 258294-265328 Cucumis sativus
Cucsa.051070 2.0kb upstream 2.0kb upstream 2000 false scaffold00557: 263329-265328 Cucumis sativus
Cucsa.051070 2.0kb downstream 2.0kb downstream 7035 true scaffold00557: 256294-263328 Cucumis sativus
Cucsa.051070 2.0kb downstream 2.0kb downstream 2000 false scaffold00557: 256294-258293 Cucumis sativus
Cucsa.051070 5.0kb upstream 5.0kb upstream 10035 true scaffold00557: 258294-268328 Cucumis sativus
Cucsa.051070 5.0kb upstream 5.0kb upstream 5000 false scaffold00557: 263329-268328 Cucumis sativus
Cucsa.051070 5.0kb downstream 5.0kb downstream 10035 true scaffold00557: 253294-263328 Cucumis sativus
Cucsa.051070 5.0kb downstream 5.0kb downstream 5000 false scaffold00557: 253294-258293 Cucumis sativus
Cucsa.051070 10.0kb upstream 10.0kb upstream 15035 true scaffold00557: 258294-273328 Cucumis sativus
Cucsa.051070 10.0kb upstream 10.0kb upstream 10000 false scaffold00557: 263329-273328 Cucumis sativus
Cucsa.051070 10.0kb downstream 10.0kb downstream 15035 true scaffold00557: 248294-263328 Cucumis sativus
Cucsa.051070 10.0kb downstream 10.0kb downstream 10000 false scaffold00557: 248294-258293 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300939 5265 Fabidae View MSA
124065023 5270 Rosid View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain