Gene : Cucsa.049560 C. sativus v1.0
Defline:  (1 of 2) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  7
Name:  ? Cucsa.049560 Secondary Identifier:  ? PAC:16954006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.049560 0.5kb upstream 0.5kb upstream 3198 true scaffold00550: 42696-45893 Cucumis sativus
Cucsa.049560 0.5kb upstream 0.5kb upstream 500 false scaffold00550: 45394-45893 Cucumis sativus
Cucsa.049560 0.5kb downstream 0.5kb downstream 3198 true scaffold00550: 42196-45393 Cucumis sativus
Cucsa.049560 0.5kb downstream 0.5kb downstream 500 false scaffold00550: 42196-42695 Cucumis sativus
Cucsa.049560 1.0kb upstream 1.0kb upstream 3698 true scaffold00550: 42696-46393 Cucumis sativus
Cucsa.049560 1.0kb upstream 1.0kb upstream 1000 false scaffold00550: 45394-46393 Cucumis sativus
Cucsa.049560 1.0kb downstream 1.0kb downstream 3698 true scaffold00550: 41696-45393 Cucumis sativus
Cucsa.049560 1.0kb downstream 1.0kb downstream 1000 false scaffold00550: 41696-42695 Cucumis sativus
Cucsa.049560 2.0kb upstream 2.0kb upstream 4698 true scaffold00550: 42696-47393 Cucumis sativus
Cucsa.049560 2.0kb upstream 2.0kb upstream 2000 false scaffold00550: 45394-47393 Cucumis sativus
Cucsa.049560 2.0kb downstream 2.0kb downstream 4698 true scaffold00550: 40696-45393 Cucumis sativus
Cucsa.049560 2.0kb downstream 2.0kb downstream 2000 false scaffold00550: 40696-42695 Cucumis sativus
Cucsa.049560 5.0kb upstream 5.0kb upstream 7698 true scaffold00550: 42696-50393 Cucumis sativus
Cucsa.049560 5.0kb upstream 5.0kb upstream 5000 false scaffold00550: 45394-50393 Cucumis sativus
Cucsa.049560 5.0kb downstream 5.0kb downstream 7698 true scaffold00550: 37696-45393 Cucumis sativus
Cucsa.049560 5.0kb downstream 5.0kb downstream 5000 false scaffold00550: 37696-42695 Cucumis sativus
Cucsa.049560 10.0kb upstream 10.0kb upstream 12698 true scaffold00550: 42696-55393 Cucumis sativus
Cucsa.049560 10.0kb upstream 10.0kb upstream 10000 false scaffold00550: 45394-55393 Cucumis sativus
Cucsa.049560 10.0kb downstream 10.0kb downstream 12698 true scaffold00550: 32696-45393 Cucumis sativus
Cucsa.049560 10.0kb downstream 10.0kb downstream 10000 false scaffold00550: 32696-42695 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312358 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain