Gene : Cucsa.048740 C. sativus v1.0
Defline:  (1 of 1) PTHR11538:SF41 - PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  569
Name:  ? Cucsa.048740 Secondary Identifier:  ? PAC:16953911
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048740 0.5kb upstream 0.5kb upstream 6772 true scaffold00542: 3371282-3378053 Cucumis sativus
Cucsa.048740 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3371282-3371781 Cucumis sativus
Cucsa.048740 0.5kb downstream 0.5kb downstream 6772 true scaffold00542: 3371782-3378553 Cucumis sativus
Cucsa.048740 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3378054-3378553 Cucumis sativus
Cucsa.048740 1.0kb upstream 1.0kb upstream 7272 true scaffold00542: 3370782-3378053 Cucumis sativus
Cucsa.048740 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3370782-3371781 Cucumis sativus
Cucsa.048740 1.0kb downstream 1.0kb downstream 7272 true scaffold00542: 3371782-3379053 Cucumis sativus
Cucsa.048740 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3378054-3379053 Cucumis sativus
Cucsa.048740 2.0kb upstream 2.0kb upstream 8272 true scaffold00542: 3369782-3378053 Cucumis sativus
Cucsa.048740 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3369782-3371781 Cucumis sativus
Cucsa.048740 2.0kb downstream 2.0kb downstream 8272 true scaffold00542: 3371782-3380053 Cucumis sativus
Cucsa.048740 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3378054-3380053 Cucumis sativus
Cucsa.048740 5.0kb upstream 5.0kb upstream 11272 true scaffold00542: 3366782-3378053 Cucumis sativus
Cucsa.048740 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3366782-3371781 Cucumis sativus
Cucsa.048740 5.0kb downstream 5.0kb downstream 11272 true scaffold00542: 3371782-3383053 Cucumis sativus
Cucsa.048740 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3378054-3383053 Cucumis sativus
Cucsa.048740 10.0kb upstream 10.0kb upstream 16272 true scaffold00542: 3361782-3378053 Cucumis sativus
Cucsa.048740 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3361782-3371781 Cucumis sativus
Cucsa.048740 10.0kb downstream 10.0kb downstream 16272 true scaffold00542: 3371782-3388053 Cucumis sativus
Cucsa.048740 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3378054-3388053 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299382 5265 Fabidae View MSA
124068878 5270 Rosid View MSA
123737426 5271 Pentapetalae View MSA
122793122 5272 Eudicot View MSA
122044413 5273 Angiosperm View MSA
121344364 5274 Embryophyte View MSA
123424081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain