Gene : Cucsa.048250 C. sativus v1.0
Defline:  (1 of 1) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  520
Name:  ? Cucsa.048250 Secondary Identifier:  ? PAC:16953827
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PHOTOALL-PWY Cucumis sativus pathologic  
Csativus PWY-101 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048250 0.5kb upstream 0.5kb upstream 4004 true scaffold00542: 3089370-3093373 Cucumis sativus
Cucsa.048250 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3089370-3089869 Cucumis sativus
Cucsa.048250 0.5kb downstream 0.5kb downstream 4004 true scaffold00542: 3089870-3093873 Cucumis sativus
Cucsa.048250 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3093374-3093873 Cucumis sativus
Cucsa.048250 1.0kb upstream 1.0kb upstream 4504 true scaffold00542: 3088870-3093373 Cucumis sativus
Cucsa.048250 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3088870-3089869 Cucumis sativus
Cucsa.048250 1.0kb downstream 1.0kb downstream 4504 true scaffold00542: 3089870-3094373 Cucumis sativus
Cucsa.048250 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3093374-3094373 Cucumis sativus
Cucsa.048250 2.0kb upstream 2.0kb upstream 5504 true scaffold00542: 3087870-3093373 Cucumis sativus
Cucsa.048250 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3087870-3089869 Cucumis sativus
Cucsa.048250 2.0kb downstream 2.0kb downstream 5504 true scaffold00542: 3089870-3095373 Cucumis sativus
Cucsa.048250 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3093374-3095373 Cucumis sativus
Cucsa.048250 5.0kb upstream 5.0kb upstream 8504 true scaffold00542: 3084870-3093373 Cucumis sativus
Cucsa.048250 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3084870-3089869 Cucumis sativus
Cucsa.048250 5.0kb downstream 5.0kb downstream 8504 true scaffold00542: 3089870-3098373 Cucumis sativus
Cucsa.048250 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3093374-3098373 Cucumis sativus
Cucsa.048250 10.0kb upstream 10.0kb upstream 13504 true scaffold00542: 3079870-3093373 Cucumis sativus
Cucsa.048250 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3079870-3089869 Cucumis sativus
Cucsa.048250 10.0kb downstream 10.0kb downstream 13504 true scaffold00542: 3089870-3103373 Cucumis sativus
Cucsa.048250 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3093374-3103373 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303230 5265 Fabidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain