Gene : Cucsa.071070 C. sativus v1.0
Defline:  (1 of 9) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  3
Name:  ? Cucsa.071070 Secondary Identifier:  ? PAC:16955486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.071070 0.5kb upstream 0.5kb upstream 8159 true scaffold00737: 45684-53842 Cucumis sativus
Cucsa.071070 0.5kb upstream 0.5kb upstream 500 false scaffold00737: 53343-53842 Cucumis sativus
Cucsa.071070 0.5kb downstream 0.5kb downstream 8159 true scaffold00737: 45184-53342 Cucumis sativus
Cucsa.071070 0.5kb downstream 0.5kb downstream 500 false scaffold00737: 45184-45683 Cucumis sativus
Cucsa.071070 1.0kb upstream 1.0kb upstream 8659 true scaffold00737: 45684-54342 Cucumis sativus
Cucsa.071070 1.0kb upstream 1.0kb upstream 1000 false scaffold00737: 53343-54342 Cucumis sativus
Cucsa.071070 1.0kb downstream 1.0kb downstream 8659 true scaffold00737: 44684-53342 Cucumis sativus
Cucsa.071070 1.0kb downstream 1.0kb downstream 1000 false scaffold00737: 44684-45683 Cucumis sativus
Cucsa.071070 2.0kb upstream 2.0kb upstream 9659 true scaffold00737: 45684-55342 Cucumis sativus
Cucsa.071070 2.0kb upstream 2.0kb upstream 2000 false scaffold00737: 53343-55342 Cucumis sativus
Cucsa.071070 2.0kb downstream 2.0kb downstream 9659 true scaffold00737: 43684-53342 Cucumis sativus
Cucsa.071070 2.0kb downstream 2.0kb downstream 2000 false scaffold00737: 43684-45683 Cucumis sativus
Cucsa.071070 5.0kb upstream 5.0kb upstream 12659 true scaffold00737: 45684-58342 Cucumis sativus
Cucsa.071070 5.0kb upstream 5.0kb upstream 5000 false scaffold00737: 53343-58342 Cucumis sativus
Cucsa.071070 5.0kb downstream 5.0kb downstream 12659 true scaffold00737: 40684-53342 Cucumis sativus
Cucsa.071070 5.0kb downstream 5.0kb downstream 5000 false scaffold00737: 40684-45683 Cucumis sativus
Cucsa.071070 10.0kb upstream 10.0kb upstream 13224 true scaffold00737: 45684-58907 Cucumis sativus
Cucsa.071070 10.0kb upstream 10.0kb upstream 5565 false scaffold00737: 53343-58907 Cucumis sativus
Cucsa.071070 10.0kb downstream 10.0kb downstream 17659 true scaffold00737: 35684-53342 Cucumis sativus
Cucsa.071070 10.0kb downstream 10.0kb downstream 10000 false scaffold00737: 35684-45683 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309356 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain