Gene : Cucsa.055380 C. sativus v1.0
Defline:  (1 of 2) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  9
Name:  ? Cucsa.055380 Secondary Identifier:  ? PAC:16954447
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYSYN-ALA-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.055380 0.5kb upstream 0.5kb upstream 4987 true scaffold00598: 138641-143627 Cucumis sativus
Cucsa.055380 0.5kb upstream 0.5kb upstream 500 false scaffold00598: 143128-143627 Cucumis sativus
Cucsa.055380 0.5kb downstream 0.5kb downstream 4987 true scaffold00598: 138141-143127 Cucumis sativus
Cucsa.055380 0.5kb downstream 0.5kb downstream 500 false scaffold00598: 138141-138640 Cucumis sativus
Cucsa.055380 1.0kb upstream 1.0kb upstream 5487 true scaffold00598: 138641-144127 Cucumis sativus
Cucsa.055380 1.0kb upstream 1.0kb upstream 1000 false scaffold00598: 143128-144127 Cucumis sativus
Cucsa.055380 1.0kb downstream 1.0kb downstream 5487 true scaffold00598: 137641-143127 Cucumis sativus
Cucsa.055380 1.0kb downstream 1.0kb downstream 1000 false scaffold00598: 137641-138640 Cucumis sativus
Cucsa.055380 2.0kb upstream 2.0kb upstream 6487 true scaffold00598: 138641-145127 Cucumis sativus
Cucsa.055380 2.0kb upstream 2.0kb upstream 2000 false scaffold00598: 143128-145127 Cucumis sativus
Cucsa.055380 2.0kb downstream 2.0kb downstream 6487 true scaffold00598: 136641-143127 Cucumis sativus
Cucsa.055380 2.0kb downstream 2.0kb downstream 2000 false scaffold00598: 136641-138640 Cucumis sativus
Cucsa.055380 5.0kb upstream 5.0kb upstream 9487 true scaffold00598: 138641-148127 Cucumis sativus
Cucsa.055380 5.0kb upstream 5.0kb upstream 5000 false scaffold00598: 143128-148127 Cucumis sativus
Cucsa.055380 5.0kb downstream 5.0kb downstream 9487 true scaffold00598: 133641-143127 Cucumis sativus
Cucsa.055380 5.0kb downstream 5.0kb downstream 5000 false scaffold00598: 133641-138640 Cucumis sativus
Cucsa.055380 10.0kb upstream 10.0kb upstream 14487 true scaffold00598: 138641-153127 Cucumis sativus
Cucsa.055380 10.0kb upstream 10.0kb upstream 10000 false scaffold00598: 143128-153127 Cucumis sativus
Cucsa.055380 10.0kb downstream 10.0kb downstream 14487 true scaffold00598: 128641-143127 Cucumis sativus
Cucsa.055380 10.0kb downstream 10.0kb downstream 10000 false scaffold00598: 128641-138640 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301665 5265 Fabidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain