Gene : Cucsa.054650 C. sativus v1.0
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  17
Name:  ? Cucsa.054650 Secondary Identifier:  ? PAC:16954430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.054650 0.5kb upstream 0.5kb upstream 1294 true scaffold00585: 208443-209736 Cucumis sativus
Cucsa.054650 0.5kb upstream 0.5kb upstream 500 false scaffold00585: 208443-208942 Cucumis sativus
Cucsa.054650 0.5kb downstream 0.5kb downstream 1294 true scaffold00585: 208943-210236 Cucumis sativus
Cucsa.054650 0.5kb downstream 0.5kb downstream 500 false scaffold00585: 209737-210236 Cucumis sativus
Cucsa.054650 1.0kb upstream 1.0kb upstream 1794 true scaffold00585: 207943-209736 Cucumis sativus
Cucsa.054650 1.0kb upstream 1.0kb upstream 1000 false scaffold00585: 207943-208942 Cucumis sativus
Cucsa.054650 1.0kb downstream 1.0kb downstream 1794 true scaffold00585: 208943-210736 Cucumis sativus
Cucsa.054650 1.0kb downstream 1.0kb downstream 1000 false scaffold00585: 209737-210736 Cucumis sativus
Cucsa.054650 2.0kb upstream 2.0kb upstream 2794 true scaffold00585: 206943-209736 Cucumis sativus
Cucsa.054650 2.0kb upstream 2.0kb upstream 2000 false scaffold00585: 206943-208942 Cucumis sativus
Cucsa.054650 2.0kb downstream 2.0kb downstream 2794 true scaffold00585: 208943-211736 Cucumis sativus
Cucsa.054650 2.0kb downstream 2.0kb downstream 2000 false scaffold00585: 209737-211736 Cucumis sativus
Cucsa.054650 5.0kb upstream 5.0kb upstream 5794 true scaffold00585: 203943-209736 Cucumis sativus
Cucsa.054650 5.0kb upstream 5.0kb upstream 5000 false scaffold00585: 203943-208942 Cucumis sativus
Cucsa.054650 5.0kb downstream 5.0kb downstream 5794 true scaffold00585: 208943-214736 Cucumis sativus
Cucsa.054650 5.0kb downstream 5.0kb downstream 5000 false scaffold00585: 209737-214736 Cucumis sativus
Cucsa.054650 10.0kb upstream 10.0kb upstream 10794 true scaffold00585: 198943-209736 Cucumis sativus
Cucsa.054650 10.0kb upstream 10.0kb upstream 10000 false scaffold00585: 198943-208942 Cucumis sativus
Cucsa.054650 10.0kb downstream 10.0kb downstream 10794 true scaffold00585: 208943-219736 Cucumis sativus
Cucsa.054650 10.0kb downstream 10.0kb downstream 10000 false scaffold00585: 209737-219736 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027233 5273 Angiosperm View MSA
122303269 5265 Fabidae View MSA
124064960 5270 Rosid View MSA
123738835 5271 Pentapetalae View MSA
122769934 5272 Eudicot View MSA
121296919 5274 Embryophyte View MSA
123335025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain