Gene : Cucsa.053480 C. sativus v1.0
Defline:  (1 of 1) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  22
Name:  ? Cucsa.053480 Secondary Identifier:  ? PAC:16954318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.053480 0.5kb upstream 0.5kb upstream 9242 true scaffold00581: 367092-376333 Cucumis sativus
Cucsa.053480 0.5kb upstream 0.5kb upstream 500 false scaffold00581: 367092-367591 Cucumis sativus
Cucsa.053480 0.5kb downstream 0.5kb downstream 9242 true scaffold00581: 367592-376833 Cucumis sativus
Cucsa.053480 0.5kb downstream 0.5kb downstream 500 false scaffold00581: 376334-376833 Cucumis sativus
Cucsa.053480 1.0kb upstream 1.0kb upstream 9742 true scaffold00581: 366592-376333 Cucumis sativus
Cucsa.053480 1.0kb upstream 1.0kb upstream 1000 false scaffold00581: 366592-367591 Cucumis sativus
Cucsa.053480 1.0kb downstream 1.0kb downstream 9742 true scaffold00581: 367592-377333 Cucumis sativus
Cucsa.053480 1.0kb downstream 1.0kb downstream 1000 false scaffold00581: 376334-377333 Cucumis sativus
Cucsa.053480 2.0kb upstream 2.0kb upstream 10742 true scaffold00581: 365592-376333 Cucumis sativus
Cucsa.053480 2.0kb upstream 2.0kb upstream 2000 false scaffold00581: 365592-367591 Cucumis sativus
Cucsa.053480 2.0kb downstream 2.0kb downstream 10742 true scaffold00581: 367592-378333 Cucumis sativus
Cucsa.053480 2.0kb downstream 2.0kb downstream 2000 false scaffold00581: 376334-378333 Cucumis sativus
Cucsa.053480 5.0kb upstream 5.0kb upstream 13742 true scaffold00581: 362592-376333 Cucumis sativus
Cucsa.053480 5.0kb upstream 5.0kb upstream 5000 false scaffold00581: 362592-367591 Cucumis sativus
Cucsa.053480 5.0kb downstream 5.0kb downstream 13742 true scaffold00581: 367592-381333 Cucumis sativus
Cucsa.053480 5.0kb downstream 5.0kb downstream 5000 false scaffold00581: 376334-381333 Cucumis sativus
Cucsa.053480 10.0kb upstream 10.0kb upstream 18742 true scaffold00581: 357592-376333 Cucumis sativus
Cucsa.053480 10.0kb upstream 10.0kb upstream 10000 false scaffold00581: 357592-367591 Cucumis sativus
Cucsa.053480 10.0kb downstream 10.0kb downstream 18742 true scaffold00581: 367592-386333 Cucumis sativus
Cucsa.053480 10.0kb downstream 10.0kb downstream 10000 false scaffold00581: 376334-386333 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain