Gene : Cucsa.052820 C. sativus v1.0
Defline:  (1 of 1) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  26
Name:  ? Cucsa.052820 Secondary Identifier:  ? PAC:16954283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.052820 0.5kb upstream 0.5kb upstream 2817 true scaffold00577: 235736-238552 Cucumis sativus
Cucsa.052820 0.5kb upstream 0.5kb upstream 500 false scaffold00577: 238053-238552 Cucumis sativus
Cucsa.052820 0.5kb downstream 0.5kb downstream 2817 true scaffold00577: 235236-238052 Cucumis sativus
Cucsa.052820 0.5kb downstream 0.5kb downstream 500 false scaffold00577: 235236-235735 Cucumis sativus
Cucsa.052820 1.0kb upstream 1.0kb upstream 3317 true scaffold00577: 235736-239052 Cucumis sativus
Cucsa.052820 1.0kb upstream 1.0kb upstream 1000 false scaffold00577: 238053-239052 Cucumis sativus
Cucsa.052820 1.0kb downstream 1.0kb downstream 3317 true scaffold00577: 234736-238052 Cucumis sativus
Cucsa.052820 1.0kb downstream 1.0kb downstream 1000 false scaffold00577: 234736-235735 Cucumis sativus
Cucsa.052820 2.0kb upstream 2.0kb upstream 4317 true scaffold00577: 235736-240052 Cucumis sativus
Cucsa.052820 2.0kb upstream 2.0kb upstream 2000 false scaffold00577: 238053-240052 Cucumis sativus
Cucsa.052820 2.0kb downstream 2.0kb downstream 4317 true scaffold00577: 233736-238052 Cucumis sativus
Cucsa.052820 2.0kb downstream 2.0kb downstream 2000 false scaffold00577: 233736-235735 Cucumis sativus
Cucsa.052820 5.0kb upstream 5.0kb upstream 7317 true scaffold00577: 235736-243052 Cucumis sativus
Cucsa.052820 5.0kb upstream 5.0kb upstream 5000 false scaffold00577: 238053-243052 Cucumis sativus
Cucsa.052820 5.0kb downstream 5.0kb downstream 7317 true scaffold00577: 230736-238052 Cucumis sativus
Cucsa.052820 5.0kb downstream 5.0kb downstream 5000 false scaffold00577: 230736-235735 Cucumis sativus
Cucsa.052820 10.0kb upstream 10.0kb upstream 12317 true scaffold00577: 235736-248052 Cucumis sativus
Cucsa.052820 10.0kb upstream 10.0kb upstream 10000 false scaffold00577: 238053-248052 Cucumis sativus
Cucsa.052820 10.0kb downstream 10.0kb downstream 12317 true scaffold00577: 225736-238052 Cucumis sativus
Cucsa.052820 10.0kb downstream 10.0kb downstream 10000 false scaffold00577: 225736-235735 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311844 5265 Fabidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain