Gene : Cucsa.053270 C. sativus v1.0
Defline:  (1 of 37) PF03514 - GRAS domain family (GRAS) Genomic Order:  1
Name:  ? Cucsa.053270 Secondary Identifier:  ? PAC:16954295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.053270 0.5kb upstream 0.5kb upstream 2920 true scaffold00581: 32234-35153 Cucumis sativus
Cucsa.053270 0.5kb upstream 0.5kb upstream 500 false scaffold00581: 32234-32733 Cucumis sativus
Cucsa.053270 0.5kb downstream 0.5kb downstream 2920 true scaffold00581: 32734-35653 Cucumis sativus
Cucsa.053270 0.5kb downstream 0.5kb downstream 500 false scaffold00581: 35154-35653 Cucumis sativus
Cucsa.053270 1.0kb upstream 1.0kb upstream 3420 true scaffold00581: 31734-35153 Cucumis sativus
Cucsa.053270 1.0kb upstream 1.0kb upstream 1000 false scaffold00581: 31734-32733 Cucumis sativus
Cucsa.053270 1.0kb downstream 1.0kb downstream 3420 true scaffold00581: 32734-36153 Cucumis sativus
Cucsa.053270 1.0kb downstream 1.0kb downstream 1000 false scaffold00581: 35154-36153 Cucumis sativus
Cucsa.053270 2.0kb upstream 2.0kb upstream 4420 true scaffold00581: 30734-35153 Cucumis sativus
Cucsa.053270 2.0kb upstream 2.0kb upstream 2000 false scaffold00581: 30734-32733 Cucumis sativus
Cucsa.053270 2.0kb downstream 2.0kb downstream 4420 true scaffold00581: 32734-37153 Cucumis sativus
Cucsa.053270 2.0kb downstream 2.0kb downstream 2000 false scaffold00581: 35154-37153 Cucumis sativus
Cucsa.053270 5.0kb upstream 5.0kb upstream 7420 true scaffold00581: 27734-35153 Cucumis sativus
Cucsa.053270 5.0kb upstream 5.0kb upstream 5000 false scaffold00581: 27734-32733 Cucumis sativus
Cucsa.053270 5.0kb downstream 5.0kb downstream 7420 true scaffold00581: 32734-40153 Cucumis sativus
Cucsa.053270 5.0kb downstream 5.0kb downstream 5000 false scaffold00581: 35154-40153 Cucumis sativus
Cucsa.053270 10.0kb upstream 10.0kb upstream 12420 true scaffold00581: 22734-35153 Cucumis sativus
Cucsa.053270 10.0kb upstream 10.0kb upstream 10000 false scaffold00581: 22734-32733 Cucumis sativus
Cucsa.053270 10.0kb downstream 10.0kb downstream 12420 true scaffold00581: 32734-45153 Cucumis sativus
Cucsa.053270 10.0kb downstream 10.0kb downstream 10000 false scaffold00581: 35154-45153 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305990 5265 Fabidae View MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain