Gene : Cucsa.051610 C. sativus v1.0
Defline:  (1 of 8) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  1
Name:  ? Cucsa.051610 Secondary Identifier:  ? PAC:16954222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.051610 0.5kb upstream 0.5kb upstream 2112 true scaffold00560: 2752-4863 Cucumis sativus
Cucsa.051610 0.5kb upstream 0.5kb upstream 500 false scaffold00560: 2752-3251 Cucumis sativus
Cucsa.051610 0.5kb downstream 0.5kb downstream 2112 true scaffold00560: 3252-5363 Cucumis sativus
Cucsa.051610 0.5kb downstream 0.5kb downstream 500 false scaffold00560: 4864-5363 Cucumis sativus
Cucsa.051610 1.0kb upstream 1.0kb upstream 2612 true scaffold00560: 2252-4863 Cucumis sativus
Cucsa.051610 1.0kb upstream 1.0kb upstream 1000 false scaffold00560: 2252-3251 Cucumis sativus
Cucsa.051610 1.0kb downstream 1.0kb downstream 2612 true scaffold00560: 3252-5863 Cucumis sativus
Cucsa.051610 1.0kb downstream 1.0kb downstream 1000 false scaffold00560: 4864-5863 Cucumis sativus
Cucsa.051610 2.0kb upstream 2.0kb upstream 3612 true scaffold00560: 1252-4863 Cucumis sativus
Cucsa.051610 2.0kb upstream 2.0kb upstream 2000 false scaffold00560: 1252-3251 Cucumis sativus
Cucsa.051610 2.0kb downstream 2.0kb downstream 3612 true scaffold00560: 3252-6863 Cucumis sativus
Cucsa.051610 2.0kb downstream 2.0kb downstream 2000 false scaffold00560: 4864-6863 Cucumis sativus
Cucsa.051610 5.0kb upstream 5.0kb upstream 4863 true scaffold00560: 1-4863 Cucumis sativus
Cucsa.051610 5.0kb upstream 5.0kb upstream 3251 false scaffold00560: 1-3251 Cucumis sativus
Cucsa.051610 5.0kb downstream 5.0kb downstream 6612 true scaffold00560: 3252-9863 Cucumis sativus
Cucsa.051610 5.0kb downstream 5.0kb downstream 5000 false scaffold00560: 4864-9863 Cucumis sativus
Cucsa.051610 10.0kb upstream 10.0kb upstream 4863 true scaffold00560: 1-4863 Cucumis sativus
Cucsa.051610 10.0kb upstream 10.0kb upstream 3251 false scaffold00560: 1-3251 Cucumis sativus
Cucsa.051610 10.0kb downstream 10.0kb downstream 11612 true scaffold00560: 3252-14863 Cucumis sativus
Cucsa.051610 10.0kb downstream 10.0kb downstream 10000 false scaffold00560: 4864-14863 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602002 5273 Angiosperm Singleton cluster - no MSA
122232236 5265 Fabidae Singleton cluster - no MSA
123978477 5270 Rosid Singleton cluster - no MSA
123554154 5271 Pentapetalae Singleton cluster - no MSA
122588968 5272 Eudicot Singleton cluster - no MSA
120874293 5274 Embryophyte Singleton cluster - no MSA
122915184 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain