Gene : Cucsa.051700 C. sativus v1.0
Defline:  (1 of 3) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  10
Name:  ? Cucsa.051700 Secondary Identifier:  ? PAC:16954241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.051700 0.5kb upstream 0.5kb upstream 3330 true scaffold00560: 148501-151830 Cucumis sativus
Cucsa.051700 0.5kb upstream 0.5kb upstream 500 false scaffold00560: 151331-151830 Cucumis sativus
Cucsa.051700 0.5kb downstream 0.5kb downstream 3330 true scaffold00560: 148001-151330 Cucumis sativus
Cucsa.051700 0.5kb downstream 0.5kb downstream 500 false scaffold00560: 148001-148500 Cucumis sativus
Cucsa.051700 1.0kb upstream 1.0kb upstream 3830 true scaffold00560: 148501-152330 Cucumis sativus
Cucsa.051700 1.0kb upstream 1.0kb upstream 1000 false scaffold00560: 151331-152330 Cucumis sativus
Cucsa.051700 1.0kb downstream 1.0kb downstream 3830 true scaffold00560: 147501-151330 Cucumis sativus
Cucsa.051700 1.0kb downstream 1.0kb downstream 1000 false scaffold00560: 147501-148500 Cucumis sativus
Cucsa.051700 2.0kb upstream 2.0kb upstream 4830 true scaffold00560: 148501-153330 Cucumis sativus
Cucsa.051700 2.0kb upstream 2.0kb upstream 2000 false scaffold00560: 151331-153330 Cucumis sativus
Cucsa.051700 2.0kb downstream 2.0kb downstream 4830 true scaffold00560: 146501-151330 Cucumis sativus
Cucsa.051700 2.0kb downstream 2.0kb downstream 2000 false scaffold00560: 146501-148500 Cucumis sativus
Cucsa.051700 5.0kb upstream 5.0kb upstream 7401 true scaffold00560: 148501-155901 Cucumis sativus
Cucsa.051700 5.0kb upstream 5.0kb upstream 4571 false scaffold00560: 151331-155901 Cucumis sativus
Cucsa.051700 5.0kb downstream 5.0kb downstream 7830 true scaffold00560: 143501-151330 Cucumis sativus
Cucsa.051700 5.0kb downstream 5.0kb downstream 5000 false scaffold00560: 143501-148500 Cucumis sativus
Cucsa.051700 10.0kb upstream 10.0kb upstream 7401 true scaffold00560: 148501-155901 Cucumis sativus
Cucsa.051700 10.0kb upstream 10.0kb upstream 4571 false scaffold00560: 151331-155901 Cucumis sativus
Cucsa.051700 10.0kb downstream 10.0kb downstream 12830 true scaffold00560: 138501-151330 Cucumis sativus
Cucsa.051700 10.0kb downstream 10.0kb downstream 10000 false scaffold00560: 138501-148500 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782986 5273 Angiosperm View MSA
122300520 5265 Fabidae View MSA
124070118 5270 Rosid View MSA
123754224 5271 Pentapetalae View MSA
122775615 5272 Eudicot View MSA
121054482 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain