Gene : Cucsa.093900 C. sativus v1.0

Defline:  (1 of 2) PTHR31773:SF11 - METACASPASE-2 Genomic Order:  25
Name:  ? Cucsa.093900 Secondary Identifier:  ? PAC:16957666

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.093900 0.5kb upstream 0.5kb upstream 4248 true scaffold00919: 151802-156049 Cucumis sativus
Cucsa.093900 0.5kb upstream 0.5kb upstream 500 false scaffold00919: 155550-156049 Cucumis sativus
Cucsa.093900 0.5kb downstream 0.5kb downstream 4248 true scaffold00919: 151302-155549 Cucumis sativus
Cucsa.093900 0.5kb downstream 0.5kb downstream 500 false scaffold00919: 151302-151801 Cucumis sativus
Cucsa.093900 1.0kb upstream 1.0kb upstream 4748 true scaffold00919: 151802-156549 Cucumis sativus
Cucsa.093900 1.0kb upstream 1.0kb upstream 1000 false scaffold00919: 155550-156549 Cucumis sativus
Cucsa.093900 1.0kb downstream 1.0kb downstream 4748 true scaffold00919: 150802-155549 Cucumis sativus
Cucsa.093900 1.0kb downstream 1.0kb downstream 1000 false scaffold00919: 150802-151801 Cucumis sativus
Cucsa.093900 2.0kb upstream 2.0kb upstream 5748 true scaffold00919: 151802-157549 Cucumis sativus
Cucsa.093900 2.0kb upstream 2.0kb upstream 2000 false scaffold00919: 155550-157549 Cucumis sativus
Cucsa.093900 2.0kb downstream 2.0kb downstream 5748 true scaffold00919: 149802-155549 Cucumis sativus
Cucsa.093900 2.0kb downstream 2.0kb downstream 2000 false scaffold00919: 149802-151801 Cucumis sativus
Cucsa.093900 5.0kb upstream 5.0kb upstream 8748 true scaffold00919: 151802-160549 Cucumis sativus
Cucsa.093900 5.0kb upstream 5.0kb upstream 5000 false scaffold00919: 155550-160549 Cucumis sativus
Cucsa.093900 5.0kb downstream 5.0kb downstream 8748 true scaffold00919: 146802-155549 Cucumis sativus
Cucsa.093900 5.0kb downstream 5.0kb downstream 5000 false scaffold00919: 146802-151801 Cucumis sativus
Cucsa.093900 10.0kb upstream 10.0kb upstream 13748 true scaffold00919: 151802-165549 Cucumis sativus
Cucsa.093900 10.0kb upstream 10.0kb upstream 10000 false scaffold00919: 155550-165549 Cucumis sativus
Cucsa.093900 10.0kb downstream 10.0kb downstream 13748 true scaffold00919: 141802-155549 Cucumis sativus
Cucsa.093900 10.0kb downstream 10.0kb downstream 10000 false scaffold00919: 141802-151801 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602533 5273 Angiosperm Singleton cluster - no MSA
122232776 5265 Fabidae Singleton cluster - no MSA
123979008 5270 Rosid Singleton cluster - no MSA
123554685 5271 Pentapetalae Singleton cluster - no MSA
122589499 5272 Eudicot Singleton cluster - no MSA
120874824 5274 Embryophyte Singleton cluster - no MSA
122915715 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain