Gene : Cucsa.100080 C. sativus v1.0
Defline:  (1 of 1) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  97
Name:  ? Cucsa.100080 Secondary Identifier:  ? PAC:16958515
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYCOGENSYNTH-PWY Cucumis sativus pathologic  
Csativus PWY-622 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.100080 0.5kb upstream 0.5kb upstream 4955 true scaffold00926: 682240-687194 Cucumis sativus
Cucsa.100080 0.5kb upstream 0.5kb upstream 500 false scaffold00926: 686695-687194 Cucumis sativus
Cucsa.100080 0.5kb downstream 0.5kb downstream 4955 true scaffold00926: 681740-686694 Cucumis sativus
Cucsa.100080 0.5kb downstream 0.5kb downstream 500 false scaffold00926: 681740-682239 Cucumis sativus
Cucsa.100080 1.0kb upstream 1.0kb upstream 5455 true scaffold00926: 682240-687694 Cucumis sativus
Cucsa.100080 1.0kb upstream 1.0kb upstream 1000 false scaffold00926: 686695-687694 Cucumis sativus
Cucsa.100080 1.0kb downstream 1.0kb downstream 5455 true scaffold00926: 681240-686694 Cucumis sativus
Cucsa.100080 1.0kb downstream 1.0kb downstream 1000 false scaffold00926: 681240-682239 Cucumis sativus
Cucsa.100080 2.0kb upstream 2.0kb upstream 6455 true scaffold00926: 682240-688694 Cucumis sativus
Cucsa.100080 2.0kb upstream 2.0kb upstream 2000 false scaffold00926: 686695-688694 Cucumis sativus
Cucsa.100080 2.0kb downstream 2.0kb downstream 6455 true scaffold00926: 680240-686694 Cucumis sativus
Cucsa.100080 2.0kb downstream 2.0kb downstream 2000 false scaffold00926: 680240-682239 Cucumis sativus
Cucsa.100080 5.0kb upstream 5.0kb upstream 9455 true scaffold00926: 682240-691694 Cucumis sativus
Cucsa.100080 5.0kb upstream 5.0kb upstream 5000 false scaffold00926: 686695-691694 Cucumis sativus
Cucsa.100080 5.0kb downstream 5.0kb downstream 9455 true scaffold00926: 677240-686694 Cucumis sativus
Cucsa.100080 5.0kb downstream 5.0kb downstream 5000 false scaffold00926: 677240-682239 Cucumis sativus
Cucsa.100080 10.0kb upstream 10.0kb upstream 14455 true scaffold00926: 682240-696694 Cucumis sativus
Cucsa.100080 10.0kb upstream 10.0kb upstream 10000 false scaffold00926: 686695-696694 Cucumis sativus
Cucsa.100080 10.0kb downstream 10.0kb downstream 14455 true scaffold00926: 672240-686694 Cucumis sativus
Cucsa.100080 10.0kb downstream 10.0kb downstream 10000 false scaffold00926: 672240-682239 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305164 5265 Fabidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain