Gene : Cucsa.100380 C. sativus v1.0
Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  123
Name:  ? Cucsa.100380 Secondary Identifier:  ? PAC:16958557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.100380 0.5kb upstream 0.5kb upstream 6774 true scaffold00926: 878714-885487 Cucumis sativus
Cucsa.100380 0.5kb upstream 0.5kb upstream 500 false scaffold00926: 878714-879213 Cucumis sativus
Cucsa.100380 0.5kb downstream 0.5kb downstream 6774 true scaffold00926: 879214-885987 Cucumis sativus
Cucsa.100380 0.5kb downstream 0.5kb downstream 500 false scaffold00926: 885488-885987 Cucumis sativus
Cucsa.100380 1.0kb upstream 1.0kb upstream 7274 true scaffold00926: 878214-885487 Cucumis sativus
Cucsa.100380 1.0kb upstream 1.0kb upstream 1000 false scaffold00926: 878214-879213 Cucumis sativus
Cucsa.100380 1.0kb downstream 1.0kb downstream 7274 true scaffold00926: 879214-886487 Cucumis sativus
Cucsa.100380 1.0kb downstream 1.0kb downstream 1000 false scaffold00926: 885488-886487 Cucumis sativus
Cucsa.100380 2.0kb upstream 2.0kb upstream 8274 true scaffold00926: 877214-885487 Cucumis sativus
Cucsa.100380 2.0kb upstream 2.0kb upstream 2000 false scaffold00926: 877214-879213 Cucumis sativus
Cucsa.100380 2.0kb downstream 2.0kb downstream 8274 true scaffold00926: 879214-887487 Cucumis sativus
Cucsa.100380 2.0kb downstream 2.0kb downstream 2000 false scaffold00926: 885488-887487 Cucumis sativus
Cucsa.100380 5.0kb upstream 5.0kb upstream 11274 true scaffold00926: 874214-885487 Cucumis sativus
Cucsa.100380 5.0kb upstream 5.0kb upstream 5000 false scaffold00926: 874214-879213 Cucumis sativus
Cucsa.100380 5.0kb downstream 5.0kb downstream 11274 true scaffold00926: 879214-890487 Cucumis sativus
Cucsa.100380 5.0kb downstream 5.0kb downstream 5000 false scaffold00926: 885488-890487 Cucumis sativus
Cucsa.100380 10.0kb upstream 10.0kb upstream 16274 true scaffold00926: 869214-885487 Cucumis sativus
Cucsa.100380 10.0kb upstream 10.0kb upstream 10000 false scaffold00926: 869214-879213 Cucumis sativus
Cucsa.100380 10.0kb downstream 10.0kb downstream 16274 true scaffold00926: 879214-895487 Cucumis sativus
Cucsa.100380 10.0kb downstream 10.0kb downstream 10000 false scaffold00926: 885488-895487 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307981 5265 Fabidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain