Gene : Cucsa.099120 C. sativus v1.0
Defline:  (1 of 2) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  1
Name:  ? Cucsa.099120 Secondary Identifier:  ? PAC:16958380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.099120 0.5kb upstream 0.5kb upstream 4570 true scaffold00926: 2493-7062 Cucumis sativus
Cucsa.099120 0.5kb upstream 0.5kb upstream 500 false scaffold00926: 6563-7062 Cucumis sativus
Cucsa.099120 0.5kb downstream 0.5kb downstream 4570 true scaffold00926: 1993-6562 Cucumis sativus
Cucsa.099120 0.5kb downstream 0.5kb downstream 500 false scaffold00926: 1993-2492 Cucumis sativus
Cucsa.099120 1.0kb upstream 1.0kb upstream 5070 true scaffold00926: 2493-7562 Cucumis sativus
Cucsa.099120 1.0kb upstream 1.0kb upstream 1000 false scaffold00926: 6563-7562 Cucumis sativus
Cucsa.099120 1.0kb downstream 1.0kb downstream 5070 true scaffold00926: 1493-6562 Cucumis sativus
Cucsa.099120 1.0kb downstream 1.0kb downstream 1000 false scaffold00926: 1493-2492 Cucumis sativus
Cucsa.099120 2.0kb upstream 2.0kb upstream 6070 true scaffold00926: 2493-8562 Cucumis sativus
Cucsa.099120 2.0kb upstream 2.0kb upstream 2000 false scaffold00926: 6563-8562 Cucumis sativus
Cucsa.099120 2.0kb downstream 2.0kb downstream 6070 true scaffold00926: 493-6562 Cucumis sativus
Cucsa.099120 2.0kb downstream 2.0kb downstream 2000 false scaffold00926: 493-2492 Cucumis sativus
Cucsa.099120 5.0kb upstream 5.0kb upstream 9070 true scaffold00926: 2493-11562 Cucumis sativus
Cucsa.099120 5.0kb upstream 5.0kb upstream 5000 false scaffold00926: 6563-11562 Cucumis sativus
Cucsa.099120 5.0kb downstream 5.0kb downstream 6562 true scaffold00926: 1-6562 Cucumis sativus
Cucsa.099120 5.0kb downstream 5.0kb downstream 2492 false scaffold00926: 1-2492 Cucumis sativus
Cucsa.099120 10.0kb upstream 10.0kb upstream 14070 true scaffold00926: 2493-16562 Cucumis sativus
Cucsa.099120 10.0kb upstream 10.0kb upstream 10000 false scaffold00926: 6563-16562 Cucumis sativus
Cucsa.099120 10.0kb downstream 10.0kb downstream 6562 true scaffold00926: 1-6562 Cucumis sativus
Cucsa.099120 10.0kb downstream 10.0kb downstream 2492 false scaffold00926: 1-2492 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602615 5273 Angiosperm Singleton cluster - no MSA
122232860 5265 Fabidae Singleton cluster - no MSA
123979090 5270 Rosid Singleton cluster - no MSA
123554767 5271 Pentapetalae Singleton cluster - no MSA
122589581 5272 Eudicot Singleton cluster - no MSA
120874906 5274 Embryophyte Singleton cluster - no MSA
122915797 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain