Gene : Cucsa.099960 C. sativus v1.0
Defline:  (1 of 1) PTHR13301:SF40 - CELLULOSE SYNTHASE-LIKE PROTEIN D4 Genomic Order:  85
Name:  ? Cucsa.099960 Secondary Identifier:  ? PAC:16958499
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5800 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.099960 0.5kb upstream 0.5kb upstream 4685 true scaffold00926: 608124-612808 Cucumis sativus
Cucsa.099960 0.5kb upstream 0.5kb upstream 500 false scaffold00926: 608124-608623 Cucumis sativus
Cucsa.099960 0.5kb downstream 0.5kb downstream 4685 true scaffold00926: 608624-613308 Cucumis sativus
Cucsa.099960 0.5kb downstream 0.5kb downstream 500 false scaffold00926: 612809-613308 Cucumis sativus
Cucsa.099960 1.0kb upstream 1.0kb upstream 5185 true scaffold00926: 607624-612808 Cucumis sativus
Cucsa.099960 1.0kb upstream 1.0kb upstream 1000 false scaffold00926: 607624-608623 Cucumis sativus
Cucsa.099960 1.0kb downstream 1.0kb downstream 5185 true scaffold00926: 608624-613808 Cucumis sativus
Cucsa.099960 1.0kb downstream 1.0kb downstream 1000 false scaffold00926: 612809-613808 Cucumis sativus
Cucsa.099960 2.0kb upstream 2.0kb upstream 6185 true scaffold00926: 606624-612808 Cucumis sativus
Cucsa.099960 2.0kb upstream 2.0kb upstream 2000 false scaffold00926: 606624-608623 Cucumis sativus
Cucsa.099960 2.0kb downstream 2.0kb downstream 6185 true scaffold00926: 608624-614808 Cucumis sativus
Cucsa.099960 2.0kb downstream 2.0kb downstream 2000 false scaffold00926: 612809-614808 Cucumis sativus
Cucsa.099960 5.0kb upstream 5.0kb upstream 9185 true scaffold00926: 603624-612808 Cucumis sativus
Cucsa.099960 5.0kb upstream 5.0kb upstream 5000 false scaffold00926: 603624-608623 Cucumis sativus
Cucsa.099960 5.0kb downstream 5.0kb downstream 9185 true scaffold00926: 608624-617808 Cucumis sativus
Cucsa.099960 5.0kb downstream 5.0kb downstream 5000 false scaffold00926: 612809-617808 Cucumis sativus
Cucsa.099960 10.0kb upstream 10.0kb upstream 14185 true scaffold00926: 598624-612808 Cucumis sativus
Cucsa.099960 10.0kb upstream 10.0kb upstream 10000 false scaffold00926: 598624-608623 Cucumis sativus
Cucsa.099960 10.0kb downstream 10.0kb downstream 14185 true scaffold00926: 608624-622808 Cucumis sativus
Cucsa.099960 10.0kb downstream 10.0kb downstream 10000 false scaffold00926: 612809-622808 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308662 5265 Fabidae View MSA
124066542 5270 Rosid View MSA
123736520 5271 Pentapetalae View MSA
122787615 5272 Eudicot View MSA
122046056 5273 Angiosperm View MSA
121310544 5274 Embryophyte View MSA
123348000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain