Gene : Cucsa.097230 C. sativus v1.0
Defline:  (1 of 4) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 Genomic Order:  358
Name:  ? Cucsa.097230 Secondary Identifier:  ? PAC:16958164
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6829 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.097230 0.5kb upstream 0.5kb upstream 3137 true scaffold00919: 2558423-2561559 Cucumis sativus
Cucsa.097230 0.5kb upstream 0.5kb upstream 500 false scaffold00919: 2558423-2558922 Cucumis sativus
Cucsa.097230 0.5kb downstream 0.5kb downstream 3137 true scaffold00919: 2558923-2562059 Cucumis sativus
Cucsa.097230 0.5kb downstream 0.5kb downstream 500 false scaffold00919: 2561560-2562059 Cucumis sativus
Cucsa.097230 1.0kb upstream 1.0kb upstream 3637 true scaffold00919: 2557923-2561559 Cucumis sativus
Cucsa.097230 1.0kb upstream 1.0kb upstream 1000 false scaffold00919: 2557923-2558922 Cucumis sativus
Cucsa.097230 1.0kb downstream 1.0kb downstream 3637 true scaffold00919: 2558923-2562559 Cucumis sativus
Cucsa.097230 1.0kb downstream 1.0kb downstream 1000 false scaffold00919: 2561560-2562559 Cucumis sativus
Cucsa.097230 2.0kb upstream 2.0kb upstream 4637 true scaffold00919: 2556923-2561559 Cucumis sativus
Cucsa.097230 2.0kb upstream 2.0kb upstream 2000 false scaffold00919: 2556923-2558922 Cucumis sativus
Cucsa.097230 2.0kb downstream 2.0kb downstream 4637 true scaffold00919: 2558923-2563559 Cucumis sativus
Cucsa.097230 2.0kb downstream 2.0kb downstream 2000 false scaffold00919: 2561560-2563559 Cucumis sativus
Cucsa.097230 5.0kb upstream 5.0kb upstream 7637 true scaffold00919: 2553923-2561559 Cucumis sativus
Cucsa.097230 5.0kb upstream 5.0kb upstream 5000 false scaffold00919: 2553923-2558922 Cucumis sativus
Cucsa.097230 5.0kb downstream 5.0kb downstream 7637 true scaffold00919: 2558923-2566559 Cucumis sativus
Cucsa.097230 5.0kb downstream 5.0kb downstream 5000 false scaffold00919: 2561560-2566559 Cucumis sativus
Cucsa.097230 10.0kb upstream 10.0kb upstream 12637 true scaffold00919: 2548923-2561559 Cucumis sativus
Cucsa.097230 10.0kb upstream 10.0kb upstream 10000 false scaffold00919: 2548923-2558922 Cucumis sativus
Cucsa.097230 10.0kb downstream 10.0kb downstream 12637 true scaffold00919: 2558923-2571559 Cucumis sativus
Cucsa.097230 10.0kb downstream 10.0kb downstream 10000 false scaffold00919: 2561560-2571559 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308077 5265 Fabidae View MSA
124068599 5270 Rosid View MSA
123740892 5271 Pentapetalae View MSA
122793671 5272 Eudicot View MSA
122046991 5273 Angiosperm View MSA
121347521 5274 Embryophyte View MSA
123425237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain