Gene : Cucsa.089860 C. sativus v1.0
Defline:  (1 of 1) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  97
Name:  ? Cucsa.089860 Secondary Identifier:  ? PAC:16957215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.089860 0.5kb upstream 0.5kb upstream 721 true scaffold00894: 1283367-1284087 Cucumis sativus
Cucsa.089860 0.5kb upstream 0.5kb upstream 500 false scaffold00894: 1283367-1283866 Cucumis sativus
Cucsa.089860 0.5kb downstream 0.5kb downstream 721 true scaffold00894: 1283867-1284587 Cucumis sativus
Cucsa.089860 0.5kb downstream 0.5kb downstream 500 false scaffold00894: 1284088-1284587 Cucumis sativus
Cucsa.089860 1.0kb upstream 1.0kb upstream 1221 true scaffold00894: 1282867-1284087 Cucumis sativus
Cucsa.089860 1.0kb upstream 1.0kb upstream 1000 false scaffold00894: 1282867-1283866 Cucumis sativus
Cucsa.089860 1.0kb downstream 1.0kb downstream 1221 true scaffold00894: 1283867-1285087 Cucumis sativus
Cucsa.089860 1.0kb downstream 1.0kb downstream 1000 false scaffold00894: 1284088-1285087 Cucumis sativus
Cucsa.089860 2.0kb upstream 2.0kb upstream 2221 true scaffold00894: 1281867-1284087 Cucumis sativus
Cucsa.089860 2.0kb upstream 2.0kb upstream 2000 false scaffold00894: 1281867-1283866 Cucumis sativus
Cucsa.089860 2.0kb downstream 2.0kb downstream 2221 true scaffold00894: 1283867-1286087 Cucumis sativus
Cucsa.089860 2.0kb downstream 2.0kb downstream 2000 false scaffold00894: 1284088-1286087 Cucumis sativus
Cucsa.089860 5.0kb upstream 5.0kb upstream 5221 true scaffold00894: 1278867-1284087 Cucumis sativus
Cucsa.089860 5.0kb upstream 5.0kb upstream 5000 false scaffold00894: 1278867-1283866 Cucumis sativus
Cucsa.089860 5.0kb downstream 5.0kb downstream 5221 true scaffold00894: 1283867-1289087 Cucumis sativus
Cucsa.089860 5.0kb downstream 5.0kb downstream 5000 false scaffold00894: 1284088-1289087 Cucumis sativus
Cucsa.089860 10.0kb upstream 10.0kb upstream 10221 true scaffold00894: 1273867-1284087 Cucumis sativus
Cucsa.089860 10.0kb upstream 10.0kb upstream 10000 false scaffold00894: 1273867-1283866 Cucumis sativus
Cucsa.089860 10.0kb downstream 10.0kb downstream 10221 true scaffold00894: 1283867-1294087 Cucumis sativus
Cucsa.089860 10.0kb downstream 10.0kb downstream 10000 false scaffold00894: 1284088-1294087 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602475 5273 Angiosperm Singleton cluster - no MSA
122232717 5265 Fabidae Singleton cluster - no MSA
123978950 5270 Rosid Singleton cluster - no MSA
123554627 5271 Pentapetalae Singleton cluster - no MSA
122589441 5272 Eudicot Singleton cluster - no MSA
120874766 5274 Embryophyte Singleton cluster - no MSA
122915657 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain