Gene : Cucsa.089160 C. sativus v1.0
Defline:  (1 of 2) PTHR11122//PTHR11122:SF22 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  26
Name:  ? Cucsa.089160 Secondary Identifier:  ? PAC:16957095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.089160 0.5kb upstream 0.5kb upstream 8100 true scaffold00894: 458160-466259 Cucumis sativus
Cucsa.089160 0.5kb upstream 0.5kb upstream 500 false scaffold00894: 458160-458659 Cucumis sativus
Cucsa.089160 0.5kb downstream 0.5kb downstream 8100 true scaffold00894: 458660-466759 Cucumis sativus
Cucsa.089160 0.5kb downstream 0.5kb downstream 500 false scaffold00894: 466260-466759 Cucumis sativus
Cucsa.089160 1.0kb upstream 1.0kb upstream 8600 true scaffold00894: 457660-466259 Cucumis sativus
Cucsa.089160 1.0kb upstream 1.0kb upstream 1000 false scaffold00894: 457660-458659 Cucumis sativus
Cucsa.089160 1.0kb downstream 1.0kb downstream 8600 true scaffold00894: 458660-467259 Cucumis sativus
Cucsa.089160 1.0kb downstream 1.0kb downstream 1000 false scaffold00894: 466260-467259 Cucumis sativus
Cucsa.089160 2.0kb upstream 2.0kb upstream 9600 true scaffold00894: 456660-466259 Cucumis sativus
Cucsa.089160 2.0kb upstream 2.0kb upstream 2000 false scaffold00894: 456660-458659 Cucumis sativus
Cucsa.089160 2.0kb downstream 2.0kb downstream 9600 true scaffold00894: 458660-468259 Cucumis sativus
Cucsa.089160 2.0kb downstream 2.0kb downstream 2000 false scaffold00894: 466260-468259 Cucumis sativus
Cucsa.089160 5.0kb upstream 5.0kb upstream 12600 true scaffold00894: 453660-466259 Cucumis sativus
Cucsa.089160 5.0kb upstream 5.0kb upstream 5000 false scaffold00894: 453660-458659 Cucumis sativus
Cucsa.089160 5.0kb downstream 5.0kb downstream 12600 true scaffold00894: 458660-471259 Cucumis sativus
Cucsa.089160 5.0kb downstream 5.0kb downstream 5000 false scaffold00894: 466260-471259 Cucumis sativus
Cucsa.089160 10.0kb upstream 10.0kb upstream 17600 true scaffold00894: 448660-466259 Cucumis sativus
Cucsa.089160 10.0kb upstream 10.0kb upstream 10000 false scaffold00894: 448660-458659 Cucumis sativus
Cucsa.089160 10.0kb downstream 10.0kb downstream 17600 true scaffold00894: 458660-476259 Cucumis sativus
Cucsa.089160 10.0kb downstream 10.0kb downstream 10000 false scaffold00894: 466260-476259 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305532 5265 Fabidae View MSA
124064506 5270 Rosid View MSA
123740956 5271 Pentapetalae View MSA
122787587 5272 Eudicot View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain