Gene : Cucsa.089240 C. sativus v1.0
Defline:  (1 of 8) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  34
Name:  ? Cucsa.089240 Secondary Identifier:  ? PAC:16957114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.089240 0.5kb upstream 0.5kb upstream 3035 true scaffold00894: 558463-561497 Cucumis sativus
Cucsa.089240 0.5kb upstream 0.5kb upstream 500 false scaffold00894: 558463-558962 Cucumis sativus
Cucsa.089240 0.5kb downstream 0.5kb downstream 3035 true scaffold00894: 558963-561997 Cucumis sativus
Cucsa.089240 0.5kb downstream 0.5kb downstream 500 false scaffold00894: 561498-561997 Cucumis sativus
Cucsa.089240 1.0kb upstream 1.0kb upstream 3535 true scaffold00894: 557963-561497 Cucumis sativus
Cucsa.089240 1.0kb upstream 1.0kb upstream 1000 false scaffold00894: 557963-558962 Cucumis sativus
Cucsa.089240 1.0kb downstream 1.0kb downstream 3535 true scaffold00894: 558963-562497 Cucumis sativus
Cucsa.089240 1.0kb downstream 1.0kb downstream 1000 false scaffold00894: 561498-562497 Cucumis sativus
Cucsa.089240 2.0kb upstream 2.0kb upstream 4535 true scaffold00894: 556963-561497 Cucumis sativus
Cucsa.089240 2.0kb upstream 2.0kb upstream 2000 false scaffold00894: 556963-558962 Cucumis sativus
Cucsa.089240 2.0kb downstream 2.0kb downstream 4535 true scaffold00894: 558963-563497 Cucumis sativus
Cucsa.089240 2.0kb downstream 2.0kb downstream 2000 false scaffold00894: 561498-563497 Cucumis sativus
Cucsa.089240 5.0kb upstream 5.0kb upstream 7535 true scaffold00894: 553963-561497 Cucumis sativus
Cucsa.089240 5.0kb upstream 5.0kb upstream 5000 false scaffold00894: 553963-558962 Cucumis sativus
Cucsa.089240 5.0kb downstream 5.0kb downstream 7535 true scaffold00894: 558963-566497 Cucumis sativus
Cucsa.089240 5.0kb downstream 5.0kb downstream 5000 false scaffold00894: 561498-566497 Cucumis sativus
Cucsa.089240 10.0kb upstream 10.0kb upstream 12535 true scaffold00894: 548963-561497 Cucumis sativus
Cucsa.089240 10.0kb upstream 10.0kb upstream 10000 false scaffold00894: 548963-558962 Cucumis sativus
Cucsa.089240 10.0kb downstream 10.0kb downstream 12535 true scaffold00894: 558963-571497 Cucumis sativus
Cucsa.089240 10.0kb downstream 10.0kb downstream 10000 false scaffold00894: 561498-571497 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309903 5265 Fabidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain