Gene : Cucsa.088680 C. sativus v1.0
Defline:  (1 of 2) 2.4.2.29 - tRNA-guanine(34) transglycosylase / tRNA transglycosylase Genomic Order:  121
Name:  ? Cucsa.088680 Secondary Identifier:  ? PAC:16957044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088680 0.5kb upstream 0.5kb upstream 4178 true scaffold00888: 940366-944543 Cucumis sativus
Cucsa.088680 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 944044-944543 Cucumis sativus
Cucsa.088680 0.5kb downstream 0.5kb downstream 4178 true scaffold00888: 939866-944043 Cucumis sativus
Cucsa.088680 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 939866-940365 Cucumis sativus
Cucsa.088680 1.0kb upstream 1.0kb upstream 4678 true scaffold00888: 940366-945043 Cucumis sativus
Cucsa.088680 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 944044-945043 Cucumis sativus
Cucsa.088680 1.0kb downstream 1.0kb downstream 4678 true scaffold00888: 939366-944043 Cucumis sativus
Cucsa.088680 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 939366-940365 Cucumis sativus
Cucsa.088680 2.0kb upstream 2.0kb upstream 5678 true scaffold00888: 940366-946043 Cucumis sativus
Cucsa.088680 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 944044-946043 Cucumis sativus
Cucsa.088680 2.0kb downstream 2.0kb downstream 5678 true scaffold00888: 938366-944043 Cucumis sativus
Cucsa.088680 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 938366-940365 Cucumis sativus
Cucsa.088680 5.0kb upstream 5.0kb upstream 8678 true scaffold00888: 940366-949043 Cucumis sativus
Cucsa.088680 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 944044-949043 Cucumis sativus
Cucsa.088680 5.0kb downstream 5.0kb downstream 8678 true scaffold00888: 935366-944043 Cucumis sativus
Cucsa.088680 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 935366-940365 Cucumis sativus
Cucsa.088680 10.0kb upstream 10.0kb upstream 13678 true scaffold00888: 940366-954043 Cucumis sativus
Cucsa.088680 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 944044-954043 Cucumis sativus
Cucsa.088680 10.0kb downstream 10.0kb downstream 13678 true scaffold00888: 930366-944043 Cucumis sativus
Cucsa.088680 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 930366-940365 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602447 5273 Angiosperm Singleton cluster - no MSA
122232689 5265 Fabidae Singleton cluster - no MSA
123978922 5270 Rosid Singleton cluster - no MSA
123554599 5271 Pentapetalae Singleton cluster - no MSA
122589413 5272 Eudicot Singleton cluster - no MSA
120874738 5274 Embryophyte Singleton cluster - no MSA
122915629 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain