Gene : Cucsa.088230 C. sativus v1.0
Defline:  (1 of 1) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  76
Name:  ? Cucsa.088230 Secondary Identifier:  ? PAC:16956973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088230 0.5kb upstream 0.5kb upstream 6028 true scaffold00888: 611114-617141 Cucumis sativus
Cucsa.088230 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 611114-611613 Cucumis sativus
Cucsa.088230 0.5kb downstream 0.5kb downstream 6028 true scaffold00888: 611614-617641 Cucumis sativus
Cucsa.088230 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 617142-617641 Cucumis sativus
Cucsa.088230 1.0kb upstream 1.0kb upstream 6528 true scaffold00888: 610614-617141 Cucumis sativus
Cucsa.088230 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 610614-611613 Cucumis sativus
Cucsa.088230 1.0kb downstream 1.0kb downstream 6528 true scaffold00888: 611614-618141 Cucumis sativus
Cucsa.088230 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 617142-618141 Cucumis sativus
Cucsa.088230 2.0kb upstream 2.0kb upstream 7528 true scaffold00888: 609614-617141 Cucumis sativus
Cucsa.088230 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 609614-611613 Cucumis sativus
Cucsa.088230 2.0kb downstream 2.0kb downstream 7528 true scaffold00888: 611614-619141 Cucumis sativus
Cucsa.088230 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 617142-619141 Cucumis sativus
Cucsa.088230 5.0kb upstream 5.0kb upstream 10528 true scaffold00888: 606614-617141 Cucumis sativus
Cucsa.088230 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 606614-611613 Cucumis sativus
Cucsa.088230 5.0kb downstream 5.0kb downstream 10528 true scaffold00888: 611614-622141 Cucumis sativus
Cucsa.088230 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 617142-622141 Cucumis sativus
Cucsa.088230 10.0kb upstream 10.0kb upstream 15528 true scaffold00888: 601614-617141 Cucumis sativus
Cucsa.088230 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 601614-611613 Cucumis sativus
Cucsa.088230 10.0kb downstream 10.0kb downstream 15528 true scaffold00888: 611614-627141 Cucumis sativus
Cucsa.088230 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 617142-627141 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
122303516 5265 Fabidae View MSA
124068509 5270 Rosid View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain