Gene : Cucsa.109940 C. sativus v1.0
Defline:  (1 of 1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 Genomic Order:  88
Name:  ? Cucsa.109940 Secondary Identifier:  ? PAC:16959962
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1121 Cucumis sativus pathologic  
Csativus PWY-321 Cucumis sativus pathologic  
Csativus PWY-5136 Cucumis sativus pathologic  
Csativus PWY-5143 Cucumis sativus pathologic  
Csativus PWY-5147 Cucumis sativus pathologic  
Csativus PWY-5156 Cucumis sativus pathologic  
Csativus PWY-561 Cucumis sativus pathologic  
Csativus PWY-5885 Cucumis sativus pathologic  
Csativus PWY-5971 Cucumis sativus pathologic  
Csativus PWY-5989 Cucumis sativus pathologic  
Csativus PWY66-389 Cucumis sativus pathologic  
Csativus PWY-6733 Cucumis sativus pathologic  
Csativus PWY-6803 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.109940 0.5kb upstream 0.5kb upstream 8387 true scaffold00934: 828110-836496 Cucumis sativus
Cucsa.109940 0.5kb upstream 0.5kb upstream 500 false scaffold00934: 828110-828609 Cucumis sativus
Cucsa.109940 0.5kb downstream 0.5kb downstream 8387 true scaffold00934: 828610-836996 Cucumis sativus
Cucsa.109940 0.5kb downstream 0.5kb downstream 500 false scaffold00934: 836497-836996 Cucumis sativus
Cucsa.109940 1.0kb upstream 1.0kb upstream 8887 true scaffold00934: 827610-836496 Cucumis sativus
Cucsa.109940 1.0kb upstream 1.0kb upstream 1000 false scaffold00934: 827610-828609 Cucumis sativus
Cucsa.109940 1.0kb downstream 1.0kb downstream 8887 true scaffold00934: 828610-837496 Cucumis sativus
Cucsa.109940 1.0kb downstream 1.0kb downstream 1000 false scaffold00934: 836497-837496 Cucumis sativus
Cucsa.109940 2.0kb upstream 2.0kb upstream 9887 true scaffold00934: 826610-836496 Cucumis sativus
Cucsa.109940 2.0kb upstream 2.0kb upstream 2000 false scaffold00934: 826610-828609 Cucumis sativus
Cucsa.109940 2.0kb downstream 2.0kb downstream 9887 true scaffold00934: 828610-838496 Cucumis sativus
Cucsa.109940 2.0kb downstream 2.0kb downstream 2000 false scaffold00934: 836497-838496 Cucumis sativus
Cucsa.109940 5.0kb upstream 5.0kb upstream 12887 true scaffold00934: 823610-836496 Cucumis sativus
Cucsa.109940 5.0kb upstream 5.0kb upstream 5000 false scaffold00934: 823610-828609 Cucumis sativus
Cucsa.109940 5.0kb downstream 5.0kb downstream 12887 true scaffold00934: 828610-841496 Cucumis sativus
Cucsa.109940 5.0kb downstream 5.0kb downstream 5000 false scaffold00934: 836497-841496 Cucumis sativus
Cucsa.109940 10.0kb upstream 10.0kb upstream 17887 true scaffold00934: 818610-836496 Cucumis sativus
Cucsa.109940 10.0kb upstream 10.0kb upstream 10000 false scaffold00934: 818610-828609 Cucumis sativus
Cucsa.109940 10.0kb downstream 10.0kb downstream 17887 true scaffold00934: 828610-846496 Cucumis sativus
Cucsa.109940 10.0kb downstream 10.0kb downstream 10000 false scaffold00934: 836497-846496 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312199 5265 Fabidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain