Gene : Cucsa.109090 C. sativus v1.0
Defline:  (1 of 1) PTHR11482:SF36 - ARGININE DECARBOXYLASE 1-RELATED Genomic Order:  4
Name:  ? Cucsa.109090 Secondary Identifier:  ? PAC:16959795
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus POLYAMINSYN3-PWY Cucumis sativus pathologic  
Csativus PWY-43 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.109090 0.5kb upstream 0.5kb upstream 3652 true scaffold00934: 44111-47762 Cucumis sativus
Cucsa.109090 0.5kb upstream 0.5kb upstream 500 false scaffold00934: 44111-44610 Cucumis sativus
Cucsa.109090 0.5kb downstream 0.5kb downstream 3652 true scaffold00934: 44611-48262 Cucumis sativus
Cucsa.109090 0.5kb downstream 0.5kb downstream 500 false scaffold00934: 47763-48262 Cucumis sativus
Cucsa.109090 1.0kb upstream 1.0kb upstream 4152 true scaffold00934: 43611-47762 Cucumis sativus
Cucsa.109090 1.0kb upstream 1.0kb upstream 1000 false scaffold00934: 43611-44610 Cucumis sativus
Cucsa.109090 1.0kb downstream 1.0kb downstream 4152 true scaffold00934: 44611-48762 Cucumis sativus
Cucsa.109090 1.0kb downstream 1.0kb downstream 1000 false scaffold00934: 47763-48762 Cucumis sativus
Cucsa.109090 2.0kb upstream 2.0kb upstream 5152 true scaffold00934: 42611-47762 Cucumis sativus
Cucsa.109090 2.0kb upstream 2.0kb upstream 2000 false scaffold00934: 42611-44610 Cucumis sativus
Cucsa.109090 2.0kb downstream 2.0kb downstream 5152 true scaffold00934: 44611-49762 Cucumis sativus
Cucsa.109090 2.0kb downstream 2.0kb downstream 2000 false scaffold00934: 47763-49762 Cucumis sativus
Cucsa.109090 5.0kb upstream 5.0kb upstream 8152 true scaffold00934: 39611-47762 Cucumis sativus
Cucsa.109090 5.0kb upstream 5.0kb upstream 5000 false scaffold00934: 39611-44610 Cucumis sativus
Cucsa.109090 5.0kb downstream 5.0kb downstream 8152 true scaffold00934: 44611-52762 Cucumis sativus
Cucsa.109090 5.0kb downstream 5.0kb downstream 5000 false scaffold00934: 47763-52762 Cucumis sativus
Cucsa.109090 10.0kb upstream 10.0kb upstream 13152 true scaffold00934: 34611-47762 Cucumis sativus
Cucsa.109090 10.0kb upstream 10.0kb upstream 10000 false scaffold00934: 34611-44610 Cucumis sativus
Cucsa.109090 10.0kb downstream 10.0kb downstream 13152 true scaffold00934: 44611-57762 Cucumis sativus
Cucsa.109090 10.0kb downstream 10.0kb downstream 10000 false scaffold00934: 47763-57762 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305392 5265 Fabidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain