Gene : Cucsa.108740 C. sativus v1.0
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  104
Name:  ? Cucsa.108740 Secondary Identifier:  ? PAC:16959774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.108740 0.5kb upstream 0.5kb upstream 1892 true scaffold00931: 1008622-1010513 Cucumis sativus
Cucsa.108740 0.5kb upstream 0.5kb upstream 500 false scaffold00931: 1008622-1009121 Cucumis sativus
Cucsa.108740 0.5kb downstream 0.5kb downstream 1892 true scaffold00931: 1009122-1011013 Cucumis sativus
Cucsa.108740 0.5kb downstream 0.5kb downstream 500 false scaffold00931: 1010514-1011013 Cucumis sativus
Cucsa.108740 1.0kb upstream 1.0kb upstream 2392 true scaffold00931: 1008122-1010513 Cucumis sativus
Cucsa.108740 1.0kb upstream 1.0kb upstream 1000 false scaffold00931: 1008122-1009121 Cucumis sativus
Cucsa.108740 1.0kb downstream 1.0kb downstream 2392 true scaffold00931: 1009122-1011513 Cucumis sativus
Cucsa.108740 1.0kb downstream 1.0kb downstream 1000 false scaffold00931: 1010514-1011513 Cucumis sativus
Cucsa.108740 2.0kb upstream 2.0kb upstream 3392 true scaffold00931: 1007122-1010513 Cucumis sativus
Cucsa.108740 2.0kb upstream 2.0kb upstream 2000 false scaffold00931: 1007122-1009121 Cucumis sativus
Cucsa.108740 2.0kb downstream 2.0kb downstream 3392 true scaffold00931: 1009122-1012513 Cucumis sativus
Cucsa.108740 2.0kb downstream 2.0kb downstream 2000 false scaffold00931: 1010514-1012513 Cucumis sativus
Cucsa.108740 5.0kb upstream 5.0kb upstream 6392 true scaffold00931: 1004122-1010513 Cucumis sativus
Cucsa.108740 5.0kb upstream 5.0kb upstream 5000 false scaffold00931: 1004122-1009121 Cucumis sativus
Cucsa.108740 5.0kb downstream 5.0kb downstream 6392 true scaffold00931: 1009122-1015513 Cucumis sativus
Cucsa.108740 5.0kb downstream 5.0kb downstream 5000 false scaffold00931: 1010514-1015513 Cucumis sativus
Cucsa.108740 10.0kb upstream 10.0kb upstream 11392 true scaffold00931: 999122-1010513 Cucumis sativus
Cucsa.108740 10.0kb upstream 10.0kb upstream 10000 false scaffold00931: 999122-1009121 Cucumis sativus
Cucsa.108740 10.0kb downstream 10.0kb downstream 11392 true scaffold00931: 1009122-1020513 Cucumis sativus
Cucsa.108740 10.0kb downstream 10.0kb downstream 10000 false scaffold00931: 1010514-1020513 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602773 5273 Angiosperm Singleton cluster - no MSA
122233018 5265 Fabidae Singleton cluster - no MSA
123979248 5270 Rosid Singleton cluster - no MSA
123554925 5271 Pentapetalae Singleton cluster - no MSA
122589739 5272 Eudicot Singleton cluster - no MSA
120875064 5274 Embryophyte Singleton cluster - no MSA
122915955 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain