Gene : Cucsa.105760 C. sativus v1.0
Defline:  (1 of 3) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  55
Name:  ? Cucsa.105760 Secondary Identifier:  ? PAC:16959370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.105760 0.5kb upstream 0.5kb upstream 4150 true scaffold00929: 271597-275746 Cucumis sativus
Cucsa.105760 0.5kb upstream 0.5kb upstream 500 false scaffold00929: 271597-272096 Cucumis sativus
Cucsa.105760 0.5kb downstream 0.5kb downstream 4150 true scaffold00929: 272097-276246 Cucumis sativus
Cucsa.105760 0.5kb downstream 0.5kb downstream 500 false scaffold00929: 275747-276246 Cucumis sativus
Cucsa.105760 1.0kb upstream 1.0kb upstream 4650 true scaffold00929: 271097-275746 Cucumis sativus
Cucsa.105760 1.0kb upstream 1.0kb upstream 1000 false scaffold00929: 271097-272096 Cucumis sativus
Cucsa.105760 1.0kb downstream 1.0kb downstream 4650 true scaffold00929: 272097-276746 Cucumis sativus
Cucsa.105760 1.0kb downstream 1.0kb downstream 1000 false scaffold00929: 275747-276746 Cucumis sativus
Cucsa.105760 2.0kb upstream 2.0kb upstream 5650 true scaffold00929: 270097-275746 Cucumis sativus
Cucsa.105760 2.0kb upstream 2.0kb upstream 2000 false scaffold00929: 270097-272096 Cucumis sativus
Cucsa.105760 2.0kb downstream 2.0kb downstream 5650 true scaffold00929: 272097-277746 Cucumis sativus
Cucsa.105760 2.0kb downstream 2.0kb downstream 2000 false scaffold00929: 275747-277746 Cucumis sativus
Cucsa.105760 5.0kb upstream 5.0kb upstream 8650 true scaffold00929: 267097-275746 Cucumis sativus
Cucsa.105760 5.0kb upstream 5.0kb upstream 5000 false scaffold00929: 267097-272096 Cucumis sativus
Cucsa.105760 5.0kb downstream 5.0kb downstream 8650 true scaffold00929: 272097-280746 Cucumis sativus
Cucsa.105760 5.0kb downstream 5.0kb downstream 5000 false scaffold00929: 275747-280746 Cucumis sativus
Cucsa.105760 10.0kb upstream 10.0kb upstream 13650 true scaffold00929: 262097-275746 Cucumis sativus
Cucsa.105760 10.0kb upstream 10.0kb upstream 10000 false scaffold00929: 262097-272096 Cucumis sativus
Cucsa.105760 10.0kb downstream 10.0kb downstream 13650 true scaffold00929: 272097-285746 Cucumis sativus
Cucsa.105760 10.0kb downstream 10.0kb downstream 10000 false scaffold00929: 275747-285746 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300036 5265 Fabidae View MSA
124067459 5270 Rosid View MSA
123739664 5271 Pentapetalae View MSA
122788885 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain