Gene : Cucsa.112300 C. sativus v1.0
Defline:  (1 of 1) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Genomic Order:  118
Name:  ? Cucsa.112300 Secondary Identifier:  ? PAC:16960159
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLUDEG-I-PWY Cucumis sativus pathologic  
Csativus PWY0-1305 Cucumis sativus pathologic  
Csativus PWY-4321 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.112300 0.5kb upstream 0.5kb upstream 3058 true scaffold00953: 935719-938776 Cucumis sativus
Cucsa.112300 0.5kb upstream 0.5kb upstream 500 false scaffold00953: 938277-938776 Cucumis sativus
Cucsa.112300 0.5kb downstream 0.5kb downstream 3058 true scaffold00953: 935219-938276 Cucumis sativus
Cucsa.112300 0.5kb downstream 0.5kb downstream 500 false scaffold00953: 935219-935718 Cucumis sativus
Cucsa.112300 1.0kb upstream 1.0kb upstream 3558 true scaffold00953: 935719-939276 Cucumis sativus
Cucsa.112300 1.0kb upstream 1.0kb upstream 1000 false scaffold00953: 938277-939276 Cucumis sativus
Cucsa.112300 1.0kb downstream 1.0kb downstream 3558 true scaffold00953: 934719-938276 Cucumis sativus
Cucsa.112300 1.0kb downstream 1.0kb downstream 1000 false scaffold00953: 934719-935718 Cucumis sativus
Cucsa.112300 2.0kb upstream 2.0kb upstream 4558 true scaffold00953: 935719-940276 Cucumis sativus
Cucsa.112300 2.0kb upstream 2.0kb upstream 2000 false scaffold00953: 938277-940276 Cucumis sativus
Cucsa.112300 2.0kb downstream 2.0kb downstream 4558 true scaffold00953: 933719-938276 Cucumis sativus
Cucsa.112300 2.0kb downstream 2.0kb downstream 2000 false scaffold00953: 933719-935718 Cucumis sativus
Cucsa.112300 5.0kb upstream 5.0kb upstream 7558 true scaffold00953: 935719-943276 Cucumis sativus
Cucsa.112300 5.0kb upstream 5.0kb upstream 5000 false scaffold00953: 938277-943276 Cucumis sativus
Cucsa.112300 5.0kb downstream 5.0kb downstream 7558 true scaffold00953: 930719-938276 Cucumis sativus
Cucsa.112300 5.0kb downstream 5.0kb downstream 5000 false scaffold00953: 930719-935718 Cucumis sativus
Cucsa.112300 10.0kb upstream 10.0kb upstream 12558 true scaffold00953: 935719-948276 Cucumis sativus
Cucsa.112300 10.0kb upstream 10.0kb upstream 10000 false scaffold00953: 938277-948276 Cucumis sativus
Cucsa.112300 10.0kb downstream 10.0kb downstream 12558 true scaffold00953: 925719-938276 Cucumis sativus
Cucsa.112300 10.0kb downstream 10.0kb downstream 10000 false scaffold00953: 925719-935718 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304634 5265 Fabidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain