Gene : Cucsa.111780 C. sativus v1.0
Defline:  (1 of 2) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  69
Name:  ? Cucsa.111780 Secondary Identifier:  ? PAC:16960094
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-2541 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.111780 0.5kb upstream 0.5kb upstream 12034 true scaffold00953: 484451-496484 Cucumis sativus
Cucsa.111780 0.5kb upstream 0.5kb upstream 500 false scaffold00953: 484451-484950 Cucumis sativus
Cucsa.111780 0.5kb downstream 0.5kb downstream 12034 true scaffold00953: 484951-496984 Cucumis sativus
Cucsa.111780 0.5kb downstream 0.5kb downstream 500 false scaffold00953: 496485-496984 Cucumis sativus
Cucsa.111780 1.0kb upstream 1.0kb upstream 12534 true scaffold00953: 483951-496484 Cucumis sativus
Cucsa.111780 1.0kb upstream 1.0kb upstream 1000 false scaffold00953: 483951-484950 Cucumis sativus
Cucsa.111780 1.0kb downstream 1.0kb downstream 12534 true scaffold00953: 484951-497484 Cucumis sativus
Cucsa.111780 1.0kb downstream 1.0kb downstream 1000 false scaffold00953: 496485-497484 Cucumis sativus
Cucsa.111780 2.0kb upstream 2.0kb upstream 13534 true scaffold00953: 482951-496484 Cucumis sativus
Cucsa.111780 2.0kb upstream 2.0kb upstream 2000 false scaffold00953: 482951-484950 Cucumis sativus
Cucsa.111780 2.0kb downstream 2.0kb downstream 13534 true scaffold00953: 484951-498484 Cucumis sativus
Cucsa.111780 2.0kb downstream 2.0kb downstream 2000 false scaffold00953: 496485-498484 Cucumis sativus
Cucsa.111780 5.0kb upstream 5.0kb upstream 16534 true scaffold00953: 479951-496484 Cucumis sativus
Cucsa.111780 5.0kb upstream 5.0kb upstream 5000 false scaffold00953: 479951-484950 Cucumis sativus
Cucsa.111780 5.0kb downstream 5.0kb downstream 16534 true scaffold00953: 484951-501484 Cucumis sativus
Cucsa.111780 5.0kb downstream 5.0kb downstream 5000 false scaffold00953: 496485-501484 Cucumis sativus
Cucsa.111780 10.0kb upstream 10.0kb upstream 21534 true scaffold00953: 474951-496484 Cucumis sativus
Cucsa.111780 10.0kb upstream 10.0kb upstream 10000 false scaffold00953: 474951-484950 Cucumis sativus
Cucsa.111780 10.0kb downstream 10.0kb downstream 21534 true scaffold00953: 484951-506484 Cucumis sativus
Cucsa.111780 10.0kb downstream 10.0kb downstream 10000 false scaffold00953: 496485-506484 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314535 5265 Fabidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain