Gene : Cucsa.103830 C. sativus v1.0
Defline:  (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  309
Name:  ? Cucsa.103830 Secondary Identifier:  ? PAC:16959099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.103830 0.5kb upstream 0.5kb upstream 3819 true scaffold00927: 2535044-2538862 Cucumis sativus
Cucsa.103830 0.5kb upstream 0.5kb upstream 500 false scaffold00927: 2535044-2535543 Cucumis sativus
Cucsa.103830 0.5kb downstream 0.5kb downstream 3819 true scaffold00927: 2535544-2539362 Cucumis sativus
Cucsa.103830 0.5kb downstream 0.5kb downstream 500 false scaffold00927: 2538863-2539362 Cucumis sativus
Cucsa.103830 1.0kb upstream 1.0kb upstream 4319 true scaffold00927: 2534544-2538862 Cucumis sativus
Cucsa.103830 1.0kb upstream 1.0kb upstream 1000 false scaffold00927: 2534544-2535543 Cucumis sativus
Cucsa.103830 1.0kb downstream 1.0kb downstream 4319 true scaffold00927: 2535544-2539862 Cucumis sativus
Cucsa.103830 1.0kb downstream 1.0kb downstream 1000 false scaffold00927: 2538863-2539862 Cucumis sativus
Cucsa.103830 2.0kb upstream 2.0kb upstream 5319 true scaffold00927: 2533544-2538862 Cucumis sativus
Cucsa.103830 2.0kb upstream 2.0kb upstream 2000 false scaffold00927: 2533544-2535543 Cucumis sativus
Cucsa.103830 2.0kb downstream 2.0kb downstream 5319 true scaffold00927: 2535544-2540862 Cucumis sativus
Cucsa.103830 2.0kb downstream 2.0kb downstream 2000 false scaffold00927: 2538863-2540862 Cucumis sativus
Cucsa.103830 5.0kb upstream 5.0kb upstream 8319 true scaffold00927: 2530544-2538862 Cucumis sativus
Cucsa.103830 5.0kb upstream 5.0kb upstream 5000 false scaffold00927: 2530544-2535543 Cucumis sativus
Cucsa.103830 5.0kb downstream 5.0kb downstream 8319 true scaffold00927: 2535544-2543862 Cucumis sativus
Cucsa.103830 5.0kb downstream 5.0kb downstream 5000 false scaffold00927: 2538863-2543862 Cucumis sativus
Cucsa.103830 10.0kb upstream 10.0kb upstream 13319 true scaffold00927: 2525544-2538862 Cucumis sativus
Cucsa.103830 10.0kb upstream 10.0kb upstream 10000 false scaffold00927: 2525544-2535543 Cucumis sativus
Cucsa.103830 10.0kb downstream 10.0kb downstream 13319 true scaffold00927: 2535544-2548862 Cucumis sativus
Cucsa.103830 10.0kb downstream 10.0kb downstream 10000 false scaffold00927: 2538863-2548862 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792559 5273 Angiosperm View MSA
122314545 5265 Fabidae View MSA
124050434 5270 Rosid View MSA
123741525 5271 Pentapetalae View MSA
122798138 5272 Eudicot View MSA
121063781 5274 Embryophyte View MSA
123103506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain