Gene : Cucsa.105570 C. sativus v1.0
Defline:  (1 of 1) PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  39
Name:  ? Cucsa.105570 Secondary Identifier:  ? PAC:16959351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.105570 0.5kb upstream 0.5kb upstream 8354 true scaffold00929: 190818-199171 Cucumis sativus
Cucsa.105570 0.5kb upstream 0.5kb upstream 500 false scaffold00929: 190818-191317 Cucumis sativus
Cucsa.105570 0.5kb downstream 0.5kb downstream 8354 true scaffold00929: 191318-199671 Cucumis sativus
Cucsa.105570 0.5kb downstream 0.5kb downstream 500 false scaffold00929: 199172-199671 Cucumis sativus
Cucsa.105570 1.0kb upstream 1.0kb upstream 8854 true scaffold00929: 190318-199171 Cucumis sativus
Cucsa.105570 1.0kb upstream 1.0kb upstream 1000 false scaffold00929: 190318-191317 Cucumis sativus
Cucsa.105570 1.0kb downstream 1.0kb downstream 8854 true scaffold00929: 191318-200171 Cucumis sativus
Cucsa.105570 1.0kb downstream 1.0kb downstream 1000 false scaffold00929: 199172-200171 Cucumis sativus
Cucsa.105570 2.0kb upstream 2.0kb upstream 9854 true scaffold00929: 189318-199171 Cucumis sativus
Cucsa.105570 2.0kb upstream 2.0kb upstream 2000 false scaffold00929: 189318-191317 Cucumis sativus
Cucsa.105570 2.0kb downstream 2.0kb downstream 9854 true scaffold00929: 191318-201171 Cucumis sativus
Cucsa.105570 2.0kb downstream 2.0kb downstream 2000 false scaffold00929: 199172-201171 Cucumis sativus
Cucsa.105570 5.0kb upstream 5.0kb upstream 12854 true scaffold00929: 186318-199171 Cucumis sativus
Cucsa.105570 5.0kb upstream 5.0kb upstream 5000 false scaffold00929: 186318-191317 Cucumis sativus
Cucsa.105570 5.0kb downstream 5.0kb downstream 12854 true scaffold00929: 191318-204171 Cucumis sativus
Cucsa.105570 5.0kb downstream 5.0kb downstream 5000 false scaffold00929: 199172-204171 Cucumis sativus
Cucsa.105570 10.0kb upstream 10.0kb upstream 17854 true scaffold00929: 181318-199171 Cucumis sativus
Cucsa.105570 10.0kb upstream 10.0kb upstream 10000 false scaffold00929: 181318-191317 Cucumis sativus
Cucsa.105570 10.0kb downstream 10.0kb downstream 17854 true scaffold00929: 191318-209171 Cucumis sativus
Cucsa.105570 10.0kb downstream 10.0kb downstream 10000 false scaffold00929: 199172-209171 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300321 5265 Fabidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain