Gene : Cucsa.123090 C. sativus v1.0
Defline:  (1 of 1) 4.2.1.109 - Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase Genomic Order:  45
Name:  ? Cucsa.123090 Secondary Identifier:  ? PAC:16961547
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-4361 Cucumis sativus pathologic  
Csativus PWY-7270 Cucumis sativus pathologic  
Csativus PWY-7528 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.123090 0.5kb upstream 0.5kb upstream 7572 true scaffold01000: 391204-398775 Cucumis sativus
Cucsa.123090 0.5kb upstream 0.5kb upstream 500 false scaffold01000: 391204-391703 Cucumis sativus
Cucsa.123090 0.5kb downstream 0.5kb downstream 7572 true scaffold01000: 391704-399275 Cucumis sativus
Cucsa.123090 0.5kb downstream 0.5kb downstream 500 false scaffold01000: 398776-399275 Cucumis sativus
Cucsa.123090 1.0kb upstream 1.0kb upstream 8072 true scaffold01000: 390704-398775 Cucumis sativus
Cucsa.123090 1.0kb upstream 1.0kb upstream 1000 false scaffold01000: 390704-391703 Cucumis sativus
Cucsa.123090 1.0kb downstream 1.0kb downstream 8072 true scaffold01000: 391704-399775 Cucumis sativus
Cucsa.123090 1.0kb downstream 1.0kb downstream 1000 false scaffold01000: 398776-399775 Cucumis sativus
Cucsa.123090 2.0kb upstream 2.0kb upstream 9072 true scaffold01000: 389704-398775 Cucumis sativus
Cucsa.123090 2.0kb upstream 2.0kb upstream 2000 false scaffold01000: 389704-391703 Cucumis sativus
Cucsa.123090 2.0kb downstream 2.0kb downstream 9072 true scaffold01000: 391704-400775 Cucumis sativus
Cucsa.123090 2.0kb downstream 2.0kb downstream 2000 false scaffold01000: 398776-400775 Cucumis sativus
Cucsa.123090 5.0kb upstream 5.0kb upstream 12072 true scaffold01000: 386704-398775 Cucumis sativus
Cucsa.123090 5.0kb upstream 5.0kb upstream 5000 false scaffold01000: 386704-391703 Cucumis sativus
Cucsa.123090 5.0kb downstream 5.0kb downstream 12072 true scaffold01000: 391704-403775 Cucumis sativus
Cucsa.123090 5.0kb downstream 5.0kb downstream 5000 false scaffold01000: 398776-403775 Cucumis sativus
Cucsa.123090 10.0kb upstream 10.0kb upstream 17072 true scaffold01000: 381704-398775 Cucumis sativus
Cucsa.123090 10.0kb upstream 10.0kb upstream 10000 false scaffold01000: 381704-391703 Cucumis sativus
Cucsa.123090 10.0kb downstream 10.0kb downstream 17072 true scaffold01000: 391704-408775 Cucumis sativus
Cucsa.123090 10.0kb downstream 10.0kb downstream 10000 false scaffold01000: 398776-408775 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306474 5265 Fabidae View MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain