Gene : Cucsa.122930 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  29
Name:  ? Cucsa.122930 Secondary Identifier:  ? PAC:16961522
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122930 0.5kb upstream 0.5kb upstream 1553 true scaffold01000: 246896-248448 Cucumis sativus
Cucsa.122930 0.5kb upstream 0.5kb upstream 500 false scaffold01000: 246896-247395 Cucumis sativus
Cucsa.122930 0.5kb downstream 0.5kb downstream 1553 true scaffold01000: 247396-248948 Cucumis sativus
Cucsa.122930 0.5kb downstream 0.5kb downstream 500 false scaffold01000: 248449-248948 Cucumis sativus
Cucsa.122930 1.0kb upstream 1.0kb upstream 2053 true scaffold01000: 246396-248448 Cucumis sativus
Cucsa.122930 1.0kb upstream 1.0kb upstream 1000 false scaffold01000: 246396-247395 Cucumis sativus
Cucsa.122930 1.0kb downstream 1.0kb downstream 2053 true scaffold01000: 247396-249448 Cucumis sativus
Cucsa.122930 1.0kb downstream 1.0kb downstream 1000 false scaffold01000: 248449-249448 Cucumis sativus
Cucsa.122930 2.0kb upstream 2.0kb upstream 3053 true scaffold01000: 245396-248448 Cucumis sativus
Cucsa.122930 2.0kb upstream 2.0kb upstream 2000 false scaffold01000: 245396-247395 Cucumis sativus
Cucsa.122930 2.0kb downstream 2.0kb downstream 3053 true scaffold01000: 247396-250448 Cucumis sativus
Cucsa.122930 2.0kb downstream 2.0kb downstream 2000 false scaffold01000: 248449-250448 Cucumis sativus
Cucsa.122930 5.0kb upstream 5.0kb upstream 6053 true scaffold01000: 242396-248448 Cucumis sativus
Cucsa.122930 5.0kb upstream 5.0kb upstream 5000 false scaffold01000: 242396-247395 Cucumis sativus
Cucsa.122930 5.0kb downstream 5.0kb downstream 6053 true scaffold01000: 247396-253448 Cucumis sativus
Cucsa.122930 5.0kb downstream 5.0kb downstream 5000 false scaffold01000: 248449-253448 Cucumis sativus
Cucsa.122930 10.0kb upstream 10.0kb upstream 11053 true scaffold01000: 237396-248448 Cucumis sativus
Cucsa.122930 10.0kb upstream 10.0kb upstream 10000 false scaffold01000: 237396-247395 Cucumis sativus
Cucsa.122930 10.0kb downstream 10.0kb downstream 11053 true scaffold01000: 247396-258448 Cucumis sativus
Cucsa.122930 10.0kb downstream 10.0kb downstream 10000 false scaffold01000: 248449-258448 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300094 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain