Gene : Cucsa.122840 C. sativus v1.0
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  20
Name:  ? Cucsa.122840 Secondary Identifier:  ? PAC:16961511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122840 0.5kb upstream 0.5kb upstream 3219 true scaffold01000: 186441-189659 Cucumis sativus
Cucsa.122840 0.5kb upstream 0.5kb upstream 500 false scaffold01000: 189160-189659 Cucumis sativus
Cucsa.122840 0.5kb downstream 0.5kb downstream 3219 true scaffold01000: 185941-189159 Cucumis sativus
Cucsa.122840 0.5kb downstream 0.5kb downstream 500 false scaffold01000: 185941-186440 Cucumis sativus
Cucsa.122840 1.0kb upstream 1.0kb upstream 3719 true scaffold01000: 186441-190159 Cucumis sativus
Cucsa.122840 1.0kb upstream 1.0kb upstream 1000 false scaffold01000: 189160-190159 Cucumis sativus
Cucsa.122840 1.0kb downstream 1.0kb downstream 3719 true scaffold01000: 185441-189159 Cucumis sativus
Cucsa.122840 1.0kb downstream 1.0kb downstream 1000 false scaffold01000: 185441-186440 Cucumis sativus
Cucsa.122840 2.0kb upstream 2.0kb upstream 4719 true scaffold01000: 186441-191159 Cucumis sativus
Cucsa.122840 2.0kb upstream 2.0kb upstream 2000 false scaffold01000: 189160-191159 Cucumis sativus
Cucsa.122840 2.0kb downstream 2.0kb downstream 4719 true scaffold01000: 184441-189159 Cucumis sativus
Cucsa.122840 2.0kb downstream 2.0kb downstream 2000 false scaffold01000: 184441-186440 Cucumis sativus
Cucsa.122840 5.0kb upstream 5.0kb upstream 7719 true scaffold01000: 186441-194159 Cucumis sativus
Cucsa.122840 5.0kb upstream 5.0kb upstream 5000 false scaffold01000: 189160-194159 Cucumis sativus
Cucsa.122840 5.0kb downstream 5.0kb downstream 7719 true scaffold01000: 181441-189159 Cucumis sativus
Cucsa.122840 5.0kb downstream 5.0kb downstream 5000 false scaffold01000: 181441-186440 Cucumis sativus
Cucsa.122840 10.0kb upstream 10.0kb upstream 12719 true scaffold01000: 186441-199159 Cucumis sativus
Cucsa.122840 10.0kb upstream 10.0kb upstream 10000 false scaffold01000: 189160-199159 Cucumis sativus
Cucsa.122840 10.0kb downstream 10.0kb downstream 12719 true scaffold01000: 176441-189159 Cucumis sativus
Cucsa.122840 10.0kb downstream 10.0kb downstream 10000 false scaffold01000: 176441-186440 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312073 5265 Fabidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain