Gene : Cucsa.122230 C. sativus v1.0
Defline:  (1 of 3) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  83
Name:  ? Cucsa.122230 Secondary Identifier:  ? PAC:16961432
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122230 0.5kb upstream 0.5kb upstream 5106 true scaffold00999: 529484-534589 Cucumis sativus
Cucsa.122230 0.5kb upstream 0.5kb upstream 500 false scaffold00999: 529484-529983 Cucumis sativus
Cucsa.122230 0.5kb downstream 0.5kb downstream 5106 true scaffold00999: 529984-535089 Cucumis sativus
Cucsa.122230 0.5kb downstream 0.5kb downstream 500 false scaffold00999: 534590-535089 Cucumis sativus
Cucsa.122230 1.0kb upstream 1.0kb upstream 5606 true scaffold00999: 528984-534589 Cucumis sativus
Cucsa.122230 1.0kb upstream 1.0kb upstream 1000 false scaffold00999: 528984-529983 Cucumis sativus
Cucsa.122230 1.0kb downstream 1.0kb downstream 5606 true scaffold00999: 529984-535589 Cucumis sativus
Cucsa.122230 1.0kb downstream 1.0kb downstream 1000 false scaffold00999: 534590-535589 Cucumis sativus
Cucsa.122230 2.0kb upstream 2.0kb upstream 6606 true scaffold00999: 527984-534589 Cucumis sativus
Cucsa.122230 2.0kb upstream 2.0kb upstream 2000 false scaffold00999: 527984-529983 Cucumis sativus
Cucsa.122230 2.0kb downstream 2.0kb downstream 6606 true scaffold00999: 529984-536589 Cucumis sativus
Cucsa.122230 2.0kb downstream 2.0kb downstream 2000 false scaffold00999: 534590-536589 Cucumis sativus
Cucsa.122230 5.0kb upstream 5.0kb upstream 9606 true scaffold00999: 524984-534589 Cucumis sativus
Cucsa.122230 5.0kb upstream 5.0kb upstream 5000 false scaffold00999: 524984-529983 Cucumis sativus
Cucsa.122230 5.0kb downstream 5.0kb downstream 9606 true scaffold00999: 529984-539589 Cucumis sativus
Cucsa.122230 5.0kb downstream 5.0kb downstream 5000 false scaffold00999: 534590-539589 Cucumis sativus
Cucsa.122230 10.0kb upstream 10.0kb upstream 14606 true scaffold00999: 519984-534589 Cucumis sativus
Cucsa.122230 10.0kb upstream 10.0kb upstream 10000 false scaffold00999: 519984-529983 Cucumis sativus
Cucsa.122230 10.0kb downstream 10.0kb downstream 14606 true scaffold00999: 529984-544589 Cucumis sativus
Cucsa.122230 10.0kb downstream 10.0kb downstream 10000 false scaffold00999: 534590-544589 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299997 5265 Fabidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain