Gene : Cucsa.122260 C. sativus v1.0
Defline:  (1 of 2) 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  86
Name:  ? Cucsa.122260 Secondary Identifier:  ? PAC:16961441
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus PWY-5690 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122260 0.5kb upstream 0.5kb upstream 5313 true scaffold00999: 546204-551516 Cucumis sativus
Cucsa.122260 0.5kb upstream 0.5kb upstream 500 false scaffold00999: 551017-551516 Cucumis sativus
Cucsa.122260 0.5kb downstream 0.5kb downstream 5313 true scaffold00999: 545704-551016 Cucumis sativus
Cucsa.122260 0.5kb downstream 0.5kb downstream 500 false scaffold00999: 545704-546203 Cucumis sativus
Cucsa.122260 1.0kb upstream 1.0kb upstream 5813 true scaffold00999: 546204-552016 Cucumis sativus
Cucsa.122260 1.0kb upstream 1.0kb upstream 1000 false scaffold00999: 551017-552016 Cucumis sativus
Cucsa.122260 1.0kb downstream 1.0kb downstream 5813 true scaffold00999: 545204-551016 Cucumis sativus
Cucsa.122260 1.0kb downstream 1.0kb downstream 1000 false scaffold00999: 545204-546203 Cucumis sativus
Cucsa.122260 2.0kb upstream 2.0kb upstream 6813 true scaffold00999: 546204-553016 Cucumis sativus
Cucsa.122260 2.0kb upstream 2.0kb upstream 2000 false scaffold00999: 551017-553016 Cucumis sativus
Cucsa.122260 2.0kb downstream 2.0kb downstream 6813 true scaffold00999: 544204-551016 Cucumis sativus
Cucsa.122260 2.0kb downstream 2.0kb downstream 2000 false scaffold00999: 544204-546203 Cucumis sativus
Cucsa.122260 5.0kb upstream 5.0kb upstream 9813 true scaffold00999: 546204-556016 Cucumis sativus
Cucsa.122260 5.0kb upstream 5.0kb upstream 5000 false scaffold00999: 551017-556016 Cucumis sativus
Cucsa.122260 5.0kb downstream 5.0kb downstream 9813 true scaffold00999: 541204-551016 Cucumis sativus
Cucsa.122260 5.0kb downstream 5.0kb downstream 5000 false scaffold00999: 541204-546203 Cucumis sativus
Cucsa.122260 10.0kb upstream 10.0kb upstream 14813 true scaffold00999: 546204-561016 Cucumis sativus
Cucsa.122260 10.0kb upstream 10.0kb upstream 10000 false scaffold00999: 551017-561016 Cucumis sativus
Cucsa.122260 10.0kb downstream 10.0kb downstream 14813 true scaffold00999: 536204-551016 Cucumis sativus
Cucsa.122260 10.0kb downstream 10.0kb downstream 10000 false scaffold00999: 536204-546203 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300000 5265 Fabidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain