Gene : Cucsa.122300 C. sativus v1.0

Defline:  (1 of 9) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  90
Name:  ? Cucsa.122300 Secondary Identifier:  ? PAC:16961449

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.122300 0.5kb upstream 0.5kb upstream 6071 true scaffold00999: 577455-583525 Cucumis sativus
Cucsa.122300 0.5kb upstream 0.5kb upstream 500 false scaffold00999: 583026-583525 Cucumis sativus
Cucsa.122300 0.5kb downstream 0.5kb downstream 6071 true scaffold00999: 576955-583025 Cucumis sativus
Cucsa.122300 0.5kb downstream 0.5kb downstream 500 false scaffold00999: 576955-577454 Cucumis sativus
Cucsa.122300 1.0kb upstream 1.0kb upstream 6571 true scaffold00999: 577455-584025 Cucumis sativus
Cucsa.122300 1.0kb upstream 1.0kb upstream 1000 false scaffold00999: 583026-584025 Cucumis sativus
Cucsa.122300 1.0kb downstream 1.0kb downstream 6571 true scaffold00999: 576455-583025 Cucumis sativus
Cucsa.122300 1.0kb downstream 1.0kb downstream 1000 false scaffold00999: 576455-577454 Cucumis sativus
Cucsa.122300 2.0kb upstream 2.0kb upstream 7571 true scaffold00999: 577455-585025 Cucumis sativus
Cucsa.122300 2.0kb upstream 2.0kb upstream 2000 false scaffold00999: 583026-585025 Cucumis sativus
Cucsa.122300 2.0kb downstream 2.0kb downstream 7571 true scaffold00999: 575455-583025 Cucumis sativus
Cucsa.122300 2.0kb downstream 2.0kb downstream 2000 false scaffold00999: 575455-577454 Cucumis sativus
Cucsa.122300 5.0kb upstream 5.0kb upstream 10571 true scaffold00999: 577455-588025 Cucumis sativus
Cucsa.122300 5.0kb upstream 5.0kb upstream 5000 false scaffold00999: 583026-588025 Cucumis sativus
Cucsa.122300 5.0kb downstream 5.0kb downstream 10571 true scaffold00999: 572455-583025 Cucumis sativus
Cucsa.122300 5.0kb downstream 5.0kb downstream 5000 false scaffold00999: 572455-577454 Cucumis sativus
Cucsa.122300 10.0kb upstream 10.0kb upstream 15571 true scaffold00999: 577455-593025 Cucumis sativus
Cucsa.122300 10.0kb upstream 10.0kb upstream 10000 false scaffold00999: 583026-593025 Cucumis sativus
Cucsa.122300 10.0kb downstream 10.0kb downstream 15571 true scaffold00999: 567455-583025 Cucumis sativus
Cucsa.122300 10.0kb downstream 10.0kb downstream 10000 false scaffold00999: 567455-577454 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304994 5265 Fabidae View MSA
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain