Gene : Cucsa.127340 C. sativus v1.0
Defline:  (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 Genomic Order:  2
Name:  ? Cucsa.127340 Secondary Identifier:  ? PAC:16962032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.127340 0.5kb upstream 0.5kb upstream 2968 true scaffold01019: 12184-15151 Cucumis sativus
Cucsa.127340 0.5kb upstream 0.5kb upstream 500 false scaffold01019: 12184-12683 Cucumis sativus
Cucsa.127340 0.5kb downstream 0.5kb downstream 2968 true scaffold01019: 12684-15651 Cucumis sativus
Cucsa.127340 0.5kb downstream 0.5kb downstream 500 false scaffold01019: 15152-15651 Cucumis sativus
Cucsa.127340 1.0kb upstream 1.0kb upstream 3468 true scaffold01019: 11684-15151 Cucumis sativus
Cucsa.127340 1.0kb upstream 1.0kb upstream 1000 false scaffold01019: 11684-12683 Cucumis sativus
Cucsa.127340 1.0kb downstream 1.0kb downstream 3468 true scaffold01019: 12684-16151 Cucumis sativus
Cucsa.127340 1.0kb downstream 1.0kb downstream 1000 false scaffold01019: 15152-16151 Cucumis sativus
Cucsa.127340 2.0kb upstream 2.0kb upstream 4468 true scaffold01019: 10684-15151 Cucumis sativus
Cucsa.127340 2.0kb upstream 2.0kb upstream 2000 false scaffold01019: 10684-12683 Cucumis sativus
Cucsa.127340 2.0kb downstream 2.0kb downstream 4468 true scaffold01019: 12684-17151 Cucumis sativus
Cucsa.127340 2.0kb downstream 2.0kb downstream 2000 false scaffold01019: 15152-17151 Cucumis sativus
Cucsa.127340 5.0kb upstream 5.0kb upstream 7468 true scaffold01019: 7684-15151 Cucumis sativus
Cucsa.127340 5.0kb upstream 5.0kb upstream 5000 false scaffold01019: 7684-12683 Cucumis sativus
Cucsa.127340 5.0kb downstream 5.0kb downstream 7468 true scaffold01019: 12684-20151 Cucumis sativus
Cucsa.127340 5.0kb downstream 5.0kb downstream 5000 false scaffold01019: 15152-20151 Cucumis sativus
Cucsa.127340 10.0kb upstream 10.0kb upstream 12468 true scaffold01019: 2684-15151 Cucumis sativus
Cucsa.127340 10.0kb upstream 10.0kb upstream 10000 false scaffold01019: 2684-12683 Cucumis sativus
Cucsa.127340 10.0kb downstream 10.0kb downstream 12468 true scaffold01019: 12684-25151 Cucumis sativus
Cucsa.127340 10.0kb downstream 10.0kb downstream 10000 false scaffold01019: 15152-25151 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041150 5273 Angiosperm View MSA
122301392 5265 Fabidae View MSA
124068497 5270 Rosid View MSA
123740030 5271 Pentapetalae View MSA
122786689 5272 Eudicot View MSA
121346999 5274 Embryophyte View MSA
123425713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain