Gene : Cucsa.126620 C. sativus v1.0
Defline:  (1 of 2) PTHR24015:SF644 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  67
Name:  ? Cucsa.126620 Secondary Identifier:  ? PAC:16961950
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.126620 0.5kb upstream 0.5kb upstream 2944 true scaffold01017: 507845-510788 Cucumis sativus
Cucsa.126620 0.5kb upstream 0.5kb upstream 500 false scaffold01017: 507845-508344 Cucumis sativus
Cucsa.126620 0.5kb downstream 0.5kb downstream 2944 true scaffold01017: 508345-511288 Cucumis sativus
Cucsa.126620 0.5kb downstream 0.5kb downstream 500 false scaffold01017: 510789-511288 Cucumis sativus
Cucsa.126620 1.0kb upstream 1.0kb upstream 3444 true scaffold01017: 507345-510788 Cucumis sativus
Cucsa.126620 1.0kb upstream 1.0kb upstream 1000 false scaffold01017: 507345-508344 Cucumis sativus
Cucsa.126620 1.0kb downstream 1.0kb downstream 3444 true scaffold01017: 508345-511788 Cucumis sativus
Cucsa.126620 1.0kb downstream 1.0kb downstream 1000 false scaffold01017: 510789-511788 Cucumis sativus
Cucsa.126620 2.0kb upstream 2.0kb upstream 4444 true scaffold01017: 506345-510788 Cucumis sativus
Cucsa.126620 2.0kb upstream 2.0kb upstream 2000 false scaffold01017: 506345-508344 Cucumis sativus
Cucsa.126620 2.0kb downstream 2.0kb downstream 4444 true scaffold01017: 508345-512788 Cucumis sativus
Cucsa.126620 2.0kb downstream 2.0kb downstream 2000 false scaffold01017: 510789-512788 Cucumis sativus
Cucsa.126620 5.0kb upstream 5.0kb upstream 7444 true scaffold01017: 503345-510788 Cucumis sativus
Cucsa.126620 5.0kb upstream 5.0kb upstream 5000 false scaffold01017: 503345-508344 Cucumis sativus
Cucsa.126620 5.0kb downstream 5.0kb downstream 7444 true scaffold01017: 508345-515788 Cucumis sativus
Cucsa.126620 5.0kb downstream 5.0kb downstream 5000 false scaffold01017: 510789-515788 Cucumis sativus
Cucsa.126620 10.0kb upstream 10.0kb upstream 12444 true scaffold01017: 498345-510788 Cucumis sativus
Cucsa.126620 10.0kb upstream 10.0kb upstream 10000 false scaffold01017: 498345-508344 Cucumis sativus
Cucsa.126620 10.0kb downstream 10.0kb downstream 12444 true scaffold01017: 508345-520788 Cucumis sativus
Cucsa.126620 10.0kb downstream 10.0kb downstream 10000 false scaffold01017: 510789-520788 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313688 5265 Fabidae View MSA
124071698 5270 Rosid View MSA
123743334 5271 Pentapetalae View MSA
122796848 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain