Gene : Cucsa.126000 C. sativus v1.0
Defline:  (1 of 10) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  5
Name:  ? Cucsa.126000 Secondary Identifier:  ? PAC:16961864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.126000 0.5kb upstream 0.5kb upstream 3863 true scaffold01017: 35624-39486 Cucumis sativus
Cucsa.126000 0.5kb upstream 0.5kb upstream 500 false scaffold01017: 38987-39486 Cucumis sativus
Cucsa.126000 0.5kb downstream 0.5kb downstream 3863 true scaffold01017: 35124-38986 Cucumis sativus
Cucsa.126000 0.5kb downstream 0.5kb downstream 500 false scaffold01017: 35124-35623 Cucumis sativus
Cucsa.126000 1.0kb upstream 1.0kb upstream 4363 true scaffold01017: 35624-39986 Cucumis sativus
Cucsa.126000 1.0kb upstream 1.0kb upstream 1000 false scaffold01017: 38987-39986 Cucumis sativus
Cucsa.126000 1.0kb downstream 1.0kb downstream 4363 true scaffold01017: 34624-38986 Cucumis sativus
Cucsa.126000 1.0kb downstream 1.0kb downstream 1000 false scaffold01017: 34624-35623 Cucumis sativus
Cucsa.126000 2.0kb upstream 2.0kb upstream 5363 true scaffold01017: 35624-40986 Cucumis sativus
Cucsa.126000 2.0kb upstream 2.0kb upstream 2000 false scaffold01017: 38987-40986 Cucumis sativus
Cucsa.126000 2.0kb downstream 2.0kb downstream 5363 true scaffold01017: 33624-38986 Cucumis sativus
Cucsa.126000 2.0kb downstream 2.0kb downstream 2000 false scaffold01017: 33624-35623 Cucumis sativus
Cucsa.126000 5.0kb upstream 5.0kb upstream 8363 true scaffold01017: 35624-43986 Cucumis sativus
Cucsa.126000 5.0kb upstream 5.0kb upstream 5000 false scaffold01017: 38987-43986 Cucumis sativus
Cucsa.126000 5.0kb downstream 5.0kb downstream 8363 true scaffold01017: 30624-38986 Cucumis sativus
Cucsa.126000 5.0kb downstream 5.0kb downstream 5000 false scaffold01017: 30624-35623 Cucumis sativus
Cucsa.126000 10.0kb upstream 10.0kb upstream 13363 true scaffold01017: 35624-48986 Cucumis sativus
Cucsa.126000 10.0kb upstream 10.0kb upstream 10000 false scaffold01017: 38987-48986 Cucumis sativus
Cucsa.126000 10.0kb downstream 10.0kb downstream 13363 true scaffold01017: 25624-38986 Cucumis sativus
Cucsa.126000 10.0kb downstream 10.0kb downstream 10000 false scaffold01017: 25624-35623 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304326 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain