Gene : Cucsa.125000 C. sativus v1.0
Defline:  (1 of 4) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  108
Name:  ? Cucsa.125000 Secondary Identifier:  ? PAC:16961803
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BRANCHED-CHAIN-AA-SYN-PWY Cucumis sativus pathologic  
Csativus ILEUSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.125000 0.5kb upstream 0.5kb upstream 6459 true scaffold01001: 813627-820085 Cucumis sativus
Cucsa.125000 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 813627-814126 Cucumis sativus
Cucsa.125000 0.5kb downstream 0.5kb downstream 6459 true scaffold01001: 814127-820585 Cucumis sativus
Cucsa.125000 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 820086-820585 Cucumis sativus
Cucsa.125000 1.0kb upstream 1.0kb upstream 6959 true scaffold01001: 813127-820085 Cucumis sativus
Cucsa.125000 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 813127-814126 Cucumis sativus
Cucsa.125000 1.0kb downstream 1.0kb downstream 6959 true scaffold01001: 814127-821085 Cucumis sativus
Cucsa.125000 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 820086-821085 Cucumis sativus
Cucsa.125000 2.0kb upstream 2.0kb upstream 7959 true scaffold01001: 812127-820085 Cucumis sativus
Cucsa.125000 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 812127-814126 Cucumis sativus
Cucsa.125000 2.0kb downstream 2.0kb downstream 7959 true scaffold01001: 814127-822085 Cucumis sativus
Cucsa.125000 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 820086-822085 Cucumis sativus
Cucsa.125000 5.0kb upstream 5.0kb upstream 10959 true scaffold01001: 809127-820085 Cucumis sativus
Cucsa.125000 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 809127-814126 Cucumis sativus
Cucsa.125000 5.0kb downstream 5.0kb downstream 10959 true scaffold01001: 814127-825085 Cucumis sativus
Cucsa.125000 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 820086-825085 Cucumis sativus
Cucsa.125000 10.0kb upstream 10.0kb upstream 15959 true scaffold01001: 804127-820085 Cucumis sativus
Cucsa.125000 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 804127-814126 Cucumis sativus
Cucsa.125000 10.0kb downstream 10.0kb downstream 15959 true scaffold01001: 814127-830085 Cucumis sativus
Cucsa.125000 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 820086-830085 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122301821 5265 Fabidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain