Gene : Cucsa.124860 C. sativus v1.0
Defline:  (1 of 2) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 Genomic Order:  94
Name:  ? Cucsa.124860 Secondary Identifier:  ? PAC:16961783
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLNSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3282 Cucumis sativus pathologic  
Csativus PWY-381 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  
Csativus PWY-6963 Cucumis sativus pathologic  
Csativus PWY-6964 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124860 0.5kb upstream 0.5kb upstream 13025 true scaffold01001: 691614-704638 Cucumis sativus
Cucsa.124860 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 704139-704638 Cucumis sativus
Cucsa.124860 0.5kb downstream 0.5kb downstream 13025 true scaffold01001: 691114-704138 Cucumis sativus
Cucsa.124860 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 691114-691613 Cucumis sativus
Cucsa.124860 1.0kb upstream 1.0kb upstream 13525 true scaffold01001: 691614-705138 Cucumis sativus
Cucsa.124860 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 704139-705138 Cucumis sativus
Cucsa.124860 1.0kb downstream 1.0kb downstream 13525 true scaffold01001: 690614-704138 Cucumis sativus
Cucsa.124860 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 690614-691613 Cucumis sativus
Cucsa.124860 2.0kb upstream 2.0kb upstream 14525 true scaffold01001: 691614-706138 Cucumis sativus
Cucsa.124860 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 704139-706138 Cucumis sativus
Cucsa.124860 2.0kb downstream 2.0kb downstream 14525 true scaffold01001: 689614-704138 Cucumis sativus
Cucsa.124860 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 689614-691613 Cucumis sativus
Cucsa.124860 5.0kb upstream 5.0kb upstream 17525 true scaffold01001: 691614-709138 Cucumis sativus
Cucsa.124860 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 704139-709138 Cucumis sativus
Cucsa.124860 5.0kb downstream 5.0kb downstream 17525 true scaffold01001: 686614-704138 Cucumis sativus
Cucsa.124860 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 686614-691613 Cucumis sativus
Cucsa.124860 10.0kb upstream 10.0kb upstream 22525 true scaffold01001: 691614-714138 Cucumis sativus
Cucsa.124860 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 704139-714138 Cucumis sativus
Cucsa.124860 10.0kb downstream 10.0kb downstream 22525 true scaffold01001: 681614-704138 Cucumis sativus
Cucsa.124860 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 681614-691613 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301363 5265 Fabidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain