Gene : Cucsa.124520 C. sativus v1.0
Defline:  (1 of 3) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  60
Name:  ? Cucsa.124520 Secondary Identifier:  ? PAC:16961721
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BRANCHED-CHAIN-AA-SYN-PWY Cucumis sativus pathologic  
Csativus LEUSYN-PWY Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus PWY-5690 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124520 0.5kb upstream 0.5kb upstream 4554 true scaffold01001: 424606-429159 Cucumis sativus
Cucsa.124520 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 424606-425105 Cucumis sativus
Cucsa.124520 0.5kb downstream 0.5kb downstream 4554 true scaffold01001: 425106-429659 Cucumis sativus
Cucsa.124520 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 429160-429659 Cucumis sativus
Cucsa.124520 1.0kb upstream 1.0kb upstream 5054 true scaffold01001: 424106-429159 Cucumis sativus
Cucsa.124520 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 424106-425105 Cucumis sativus
Cucsa.124520 1.0kb downstream 1.0kb downstream 5054 true scaffold01001: 425106-430159 Cucumis sativus
Cucsa.124520 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 429160-430159 Cucumis sativus
Cucsa.124520 2.0kb upstream 2.0kb upstream 6054 true scaffold01001: 423106-429159 Cucumis sativus
Cucsa.124520 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 423106-425105 Cucumis sativus
Cucsa.124520 2.0kb downstream 2.0kb downstream 6054 true scaffold01001: 425106-431159 Cucumis sativus
Cucsa.124520 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 429160-431159 Cucumis sativus
Cucsa.124520 5.0kb upstream 5.0kb upstream 9054 true scaffold01001: 420106-429159 Cucumis sativus
Cucsa.124520 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 420106-425105 Cucumis sativus
Cucsa.124520 5.0kb downstream 5.0kb downstream 9054 true scaffold01001: 425106-434159 Cucumis sativus
Cucsa.124520 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 429160-434159 Cucumis sativus
Cucsa.124520 10.0kb upstream 10.0kb upstream 14054 true scaffold01001: 415106-429159 Cucumis sativus
Cucsa.124520 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 415106-425105 Cucumis sativus
Cucsa.124520 10.0kb downstream 10.0kb downstream 14054 true scaffold01001: 425106-439159 Cucumis sativus
Cucsa.124520 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 429160-439159 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302631 5265 Fabidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain