Gene : Cucsa.124150 C. sativus v1.0
Defline:  (1 of 1) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  23
Name:  ? Cucsa.124150 Secondary Identifier:  ? PAC:16961664
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124150 0.5kb upstream 0.5kb upstream 1322 true scaffold01001: 187315-188636 Cucumis sativus
Cucsa.124150 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 187315-187814 Cucumis sativus
Cucsa.124150 0.5kb downstream 0.5kb downstream 1322 true scaffold01001: 187815-189136 Cucumis sativus
Cucsa.124150 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 188637-189136 Cucumis sativus
Cucsa.124150 1.0kb upstream 1.0kb upstream 1822 true scaffold01001: 186815-188636 Cucumis sativus
Cucsa.124150 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 186815-187814 Cucumis sativus
Cucsa.124150 1.0kb downstream 1.0kb downstream 1822 true scaffold01001: 187815-189636 Cucumis sativus
Cucsa.124150 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 188637-189636 Cucumis sativus
Cucsa.124150 2.0kb upstream 2.0kb upstream 2822 true scaffold01001: 185815-188636 Cucumis sativus
Cucsa.124150 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 185815-187814 Cucumis sativus
Cucsa.124150 2.0kb downstream 2.0kb downstream 2822 true scaffold01001: 187815-190636 Cucumis sativus
Cucsa.124150 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 188637-190636 Cucumis sativus
Cucsa.124150 5.0kb upstream 5.0kb upstream 5822 true scaffold01001: 182815-188636 Cucumis sativus
Cucsa.124150 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 182815-187814 Cucumis sativus
Cucsa.124150 5.0kb downstream 5.0kb downstream 5822 true scaffold01001: 187815-193636 Cucumis sativus
Cucsa.124150 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 188637-193636 Cucumis sativus
Cucsa.124150 10.0kb upstream 10.0kb upstream 10822 true scaffold01001: 177815-188636 Cucumis sativus
Cucsa.124150 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 177815-187814 Cucumis sativus
Cucsa.124150 10.0kb downstream 10.0kb downstream 10822 true scaffold01001: 187815-198636 Cucumis sativus
Cucsa.124150 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 188637-198636 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305386 5265 Fabidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain