Gene : Cucsa.124480 C. sativus v1.0
Defline:  (1 of 9) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  56
Name:  ? Cucsa.124480 Secondary Identifier:  ? PAC:16961717
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1121 Cucumis sativus pathologic  
Csativus PWY1F-467 Cucumis sativus pathologic  
Csativus PWY-7186 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124480 0.5kb upstream 0.5kb upstream 2773 true scaffold01001: 408088-410860 Cucumis sativus
Cucsa.124480 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 410361-410860 Cucumis sativus
Cucsa.124480 0.5kb downstream 0.5kb downstream 2773 true scaffold01001: 407588-410360 Cucumis sativus
Cucsa.124480 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 407588-408087 Cucumis sativus
Cucsa.124480 1.0kb upstream 1.0kb upstream 3273 true scaffold01001: 408088-411360 Cucumis sativus
Cucsa.124480 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 410361-411360 Cucumis sativus
Cucsa.124480 1.0kb downstream 1.0kb downstream 3273 true scaffold01001: 407088-410360 Cucumis sativus
Cucsa.124480 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 407088-408087 Cucumis sativus
Cucsa.124480 2.0kb upstream 2.0kb upstream 4273 true scaffold01001: 408088-412360 Cucumis sativus
Cucsa.124480 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 410361-412360 Cucumis sativus
Cucsa.124480 2.0kb downstream 2.0kb downstream 4273 true scaffold01001: 406088-410360 Cucumis sativus
Cucsa.124480 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 406088-408087 Cucumis sativus
Cucsa.124480 5.0kb upstream 5.0kb upstream 7273 true scaffold01001: 408088-415360 Cucumis sativus
Cucsa.124480 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 410361-415360 Cucumis sativus
Cucsa.124480 5.0kb downstream 5.0kb downstream 7273 true scaffold01001: 403088-410360 Cucumis sativus
Cucsa.124480 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 403088-408087 Cucumis sativus
Cucsa.124480 10.0kb upstream 10.0kb upstream 12273 true scaffold01001: 408088-420360 Cucumis sativus
Cucsa.124480 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 410361-420360 Cucumis sativus
Cucsa.124480 10.0kb downstream 10.0kb downstream 12273 true scaffold01001: 398088-410360 Cucumis sativus
Cucsa.124480 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 398088-408087 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain