Gene : Cucsa.124850 C. sativus v1.0
Defline:  (1 of 2) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 Genomic Order:  93
Name:  ? Cucsa.124850 Secondary Identifier:  ? PAC:16961782
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLNSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3282 Cucumis sativus pathologic  
Csativus PWY-381 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  
Csativus PWY-6963 Cucumis sativus pathologic  
Csativus PWY-6964 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124850 0.5kb upstream 0.5kb upstream 13220 true scaffold01001: 673629-686848 Cucumis sativus
Cucsa.124850 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 686349-686848 Cucumis sativus
Cucsa.124850 0.5kb downstream 0.5kb downstream 13220 true scaffold01001: 673129-686348 Cucumis sativus
Cucsa.124850 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 673129-673628 Cucumis sativus
Cucsa.124850 1.0kb upstream 1.0kb upstream 13720 true scaffold01001: 673629-687348 Cucumis sativus
Cucsa.124850 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 686349-687348 Cucumis sativus
Cucsa.124850 1.0kb downstream 1.0kb downstream 13720 true scaffold01001: 672629-686348 Cucumis sativus
Cucsa.124850 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 672629-673628 Cucumis sativus
Cucsa.124850 2.0kb upstream 2.0kb upstream 14720 true scaffold01001: 673629-688348 Cucumis sativus
Cucsa.124850 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 686349-688348 Cucumis sativus
Cucsa.124850 2.0kb downstream 2.0kb downstream 14720 true scaffold01001: 671629-686348 Cucumis sativus
Cucsa.124850 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 671629-673628 Cucumis sativus
Cucsa.124850 5.0kb upstream 5.0kb upstream 17720 true scaffold01001: 673629-691348 Cucumis sativus
Cucsa.124850 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 686349-691348 Cucumis sativus
Cucsa.124850 5.0kb downstream 5.0kb downstream 17720 true scaffold01001: 668629-686348 Cucumis sativus
Cucsa.124850 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 668629-673628 Cucumis sativus
Cucsa.124850 10.0kb upstream 10.0kb upstream 22720 true scaffold01001: 673629-696348 Cucumis sativus
Cucsa.124850 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 686349-696348 Cucumis sativus
Cucsa.124850 10.0kb downstream 10.0kb downstream 22720 true scaffold01001: 663629-686348 Cucumis sativus
Cucsa.124850 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 663629-673628 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301363 5265 Fabidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain