Gene : Cucsa.117080 C. sativus v1.0
Defline:  (1 of 2) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  99
Name:  ? Cucsa.117080 Secondary Identifier:  ? PAC:16960671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.117080 0.5kb upstream 0.5kb upstream 3987 true scaffold00995: 797155-801141 Cucumis sativus
Cucsa.117080 0.5kb upstream 0.5kb upstream 500 false scaffold00995: 800642-801141 Cucumis sativus
Cucsa.117080 0.5kb downstream 0.5kb downstream 3987 true scaffold00995: 796655-800641 Cucumis sativus
Cucsa.117080 0.5kb downstream 0.5kb downstream 500 false scaffold00995: 796655-797154 Cucumis sativus
Cucsa.117080 1.0kb upstream 1.0kb upstream 4487 true scaffold00995: 797155-801641 Cucumis sativus
Cucsa.117080 1.0kb upstream 1.0kb upstream 1000 false scaffold00995: 800642-801641 Cucumis sativus
Cucsa.117080 1.0kb downstream 1.0kb downstream 4487 true scaffold00995: 796155-800641 Cucumis sativus
Cucsa.117080 1.0kb downstream 1.0kb downstream 1000 false scaffold00995: 796155-797154 Cucumis sativus
Cucsa.117080 2.0kb upstream 2.0kb upstream 5487 true scaffold00995: 797155-802641 Cucumis sativus
Cucsa.117080 2.0kb upstream 2.0kb upstream 2000 false scaffold00995: 800642-802641 Cucumis sativus
Cucsa.117080 2.0kb downstream 2.0kb downstream 5487 true scaffold00995: 795155-800641 Cucumis sativus
Cucsa.117080 2.0kb downstream 2.0kb downstream 2000 false scaffold00995: 795155-797154 Cucumis sativus
Cucsa.117080 5.0kb upstream 5.0kb upstream 8487 true scaffold00995: 797155-805641 Cucumis sativus
Cucsa.117080 5.0kb upstream 5.0kb upstream 5000 false scaffold00995: 800642-805641 Cucumis sativus
Cucsa.117080 5.0kb downstream 5.0kb downstream 8487 true scaffold00995: 792155-800641 Cucumis sativus
Cucsa.117080 5.0kb downstream 5.0kb downstream 5000 false scaffold00995: 792155-797154 Cucumis sativus
Cucsa.117080 10.0kb upstream 10.0kb upstream 13487 true scaffold00995: 797155-810641 Cucumis sativus
Cucsa.117080 10.0kb upstream 10.0kb upstream 10000 false scaffold00995: 800642-810641 Cucumis sativus
Cucsa.117080 10.0kb downstream 10.0kb downstream 13487 true scaffold00995: 787155-800641 Cucumis sativus
Cucsa.117080 10.0kb downstream 10.0kb downstream 10000 false scaffold00995: 787155-797154 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299500 5265 Fabidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain