Gene : Cucsa.114800 C. sativus v1.0
Defline:  (1 of 7) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  19
Name:  ? Cucsa.114800 Secondary Identifier:  ? PAC:16960436
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.114800 0.5kb upstream 0.5kb upstream 2686 true scaffold00968: 145794-148479 Cucumis sativus
Cucsa.114800 0.5kb upstream 0.5kb upstream 500 false scaffold00968: 147980-148479 Cucumis sativus
Cucsa.114800 0.5kb downstream 0.5kb downstream 2686 true scaffold00968: 145294-147979 Cucumis sativus
Cucsa.114800 0.5kb downstream 0.5kb downstream 500 false scaffold00968: 145294-145793 Cucumis sativus
Cucsa.114800 1.0kb upstream 1.0kb upstream 3186 true scaffold00968: 145794-148979 Cucumis sativus
Cucsa.114800 1.0kb upstream 1.0kb upstream 1000 false scaffold00968: 147980-148979 Cucumis sativus
Cucsa.114800 1.0kb downstream 1.0kb downstream 3186 true scaffold00968: 144794-147979 Cucumis sativus
Cucsa.114800 1.0kb downstream 1.0kb downstream 1000 false scaffold00968: 144794-145793 Cucumis sativus
Cucsa.114800 2.0kb upstream 2.0kb upstream 4186 true scaffold00968: 145794-149979 Cucumis sativus
Cucsa.114800 2.0kb upstream 2.0kb upstream 2000 false scaffold00968: 147980-149979 Cucumis sativus
Cucsa.114800 2.0kb downstream 2.0kb downstream 4186 true scaffold00968: 143794-147979 Cucumis sativus
Cucsa.114800 2.0kb downstream 2.0kb downstream 2000 false scaffold00968: 143794-145793 Cucumis sativus
Cucsa.114800 5.0kb upstream 5.0kb upstream 7186 true scaffold00968: 145794-152979 Cucumis sativus
Cucsa.114800 5.0kb upstream 5.0kb upstream 5000 false scaffold00968: 147980-152979 Cucumis sativus
Cucsa.114800 5.0kb downstream 5.0kb downstream 7186 true scaffold00968: 140794-147979 Cucumis sativus
Cucsa.114800 5.0kb downstream 5.0kb downstream 5000 false scaffold00968: 140794-145793 Cucumis sativus
Cucsa.114800 10.0kb upstream 10.0kb upstream 12186 true scaffold00968: 145794-157979 Cucumis sativus
Cucsa.114800 10.0kb upstream 10.0kb upstream 10000 false scaffold00968: 147980-157979 Cucumis sativus
Cucsa.114800 10.0kb downstream 10.0kb downstream 12186 true scaffold00968: 135794-147979 Cucumis sativus
Cucsa.114800 10.0kb downstream 10.0kb downstream 10000 false scaffold00968: 135794-145793 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122236877 5265 Fabidae View MSA
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain