Gene : Cucsa.119340 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  113
Name:  ? Cucsa.119340 Secondary Identifier:  ? PAC:16960972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.119340 0.5kb upstream 0.5kb upstream 14327 true scaffold00998: 1237951-1252277 Cucumis sativus
Cucsa.119340 0.5kb upstream 0.5kb upstream 500 false scaffold00998: 1251778-1252277 Cucumis sativus
Cucsa.119340 0.5kb downstream 0.5kb downstream 14327 true scaffold00998: 1237451-1251777 Cucumis sativus
Cucsa.119340 0.5kb downstream 0.5kb downstream 500 false scaffold00998: 1237451-1237950 Cucumis sativus
Cucsa.119340 1.0kb upstream 1.0kb upstream 14827 true scaffold00998: 1237951-1252777 Cucumis sativus
Cucsa.119340 1.0kb upstream 1.0kb upstream 1000 false scaffold00998: 1251778-1252777 Cucumis sativus
Cucsa.119340 1.0kb downstream 1.0kb downstream 14827 true scaffold00998: 1236951-1251777 Cucumis sativus
Cucsa.119340 1.0kb downstream 1.0kb downstream 1000 false scaffold00998: 1236951-1237950 Cucumis sativus
Cucsa.119340 2.0kb upstream 2.0kb upstream 15827 true scaffold00998: 1237951-1253777 Cucumis sativus
Cucsa.119340 2.0kb upstream 2.0kb upstream 2000 false scaffold00998: 1251778-1253777 Cucumis sativus
Cucsa.119340 2.0kb downstream 2.0kb downstream 15827 true scaffold00998: 1235951-1251777 Cucumis sativus
Cucsa.119340 2.0kb downstream 2.0kb downstream 2000 false scaffold00998: 1235951-1237950 Cucumis sativus
Cucsa.119340 5.0kb upstream 5.0kb upstream 18827 true scaffold00998: 1237951-1256777 Cucumis sativus
Cucsa.119340 5.0kb upstream 5.0kb upstream 5000 false scaffold00998: 1251778-1256777 Cucumis sativus
Cucsa.119340 5.0kb downstream 5.0kb downstream 18827 true scaffold00998: 1232951-1251777 Cucumis sativus
Cucsa.119340 5.0kb downstream 5.0kb downstream 5000 false scaffold00998: 1232951-1237950 Cucumis sativus
Cucsa.119340 10.0kb upstream 10.0kb upstream 23827 true scaffold00998: 1237951-1261777 Cucumis sativus
Cucsa.119340 10.0kb upstream 10.0kb upstream 10000 false scaffold00998: 1251778-1261777 Cucumis sativus
Cucsa.119340 10.0kb downstream 10.0kb downstream 23827 true scaffold00998: 1227951-1251777 Cucumis sativus
Cucsa.119340 10.0kb downstream 10.0kb downstream 10000 false scaffold00998: 1227951-1237950 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309054 5265 Fabidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain